Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0552 ATGAGGCAAAAGAAGAACAACACAGATTCAAGTGGTTTCTTGGGAAGCATTTCTTCGAATTTTCTCAGATCAATCTCTTCTTCCAATCGCAAACCCACTTCTTCATCCTTTACAAACCATAAATTCCTAAAGTCGGACGTTGAAAACACTCCCCCTACCCATCCAAACATTTCCCTCAATCACCACCAACAATTGAAGCCCACCGACCCATTTCCCCAGAGCAACTCACATGTGAAGGTTGTGGTGAGAATTAAGCCAGAAAATATCAATGGAAAAGAGGGGGATTGGGAAATTAAGAAGGTTTCTTCTGATGCCCTGTGTATTGGGGACATAAAGTTCATGTTTGATGAAGTTTTTGATGGCAACTCCAATCAGGAAGATGTTTTTCAGTCAGTGGGTGTTCCCTTGGTTAGAAATGCCTTAGCTGGTTACAACACTACTATTCTGTCATTTGGCCAGTCTGGGAGTGGAAAGACTTACACAATGTGGGGTCCCCCAAGTGCCATGGTTGATGAGTCCTCGTCTTCTAGTCAATTGGGAATTGTTCCTCGGATCTTCAGAATGTTATTATCTGAGTTAGAGAGAGAGAGGCTTGCTTCTGATCAGAAGCAGTTCAACTATCAATGTCGCTGTTCATTTCTCGAGATAAACAACGAACGAATTGGCAATTTACTCAATCCTATCCAGCAGAACCTTGAGATGAAGGATGATTCAAGAAATGCTCCTTATATTGAGAATCTGGTTGAGGAATACATCACTAATTATGATGATGTGGCACAAATTTTGATTAAGGGCCTTTCAAGGAGGAAAAAGGAAGCAACAAGCTTAAATTCTAATAGCTCTGGATCGCACATAATTTTCACTTTTGTCATTGAATCTTTGTGCAAGGGAACCACAAAGGACATTTTCAGTAGCTCAAAAGTTAGCAGAATCAGCCTTATTGATCTTGCTGGACTGGACAGGGATGAAGTTGGTGATGTAGGTAGCCAATGTGCAAGGGAAAACAGACAAGTAGAGAAATCAGTGTCTCAGCTTGAGCATTTAGTGGATGCTCTGACTAAGAAATCTCAGTCTGGAAAAAATGGAGACATTCTGCACAGCGACTCCTGTTTAACACGCTTACTACAAGAACCACTTGGTGGAAATGCCAAACTTTCAGTAATATGTTCCATCTCCCCTAATAACAAGAGTAACGATAAAACCCTGCGCACACTCAGATTTGGTGAGCAGGTAAGATCCATCAGAAATGAGCCTGTTATCAATGTAATAAAGGAGACTGATGTTGATTTGAGTAATAACATCAGACACTTGAAGGAAGAACTTATTAGAGCAAAGACTGATATTCACAGCTCAGCTGGGAGTAAAGATGGATACTTCCAAGGACAAAATGTGCGGGAAAGCCTGAATCAGATGAGAGTCAGCTTAAACCGCTCTCTTCTCTTATCCAACATAGATTGTGATACTATTGAGCGCGTAAATGTCAGTGAGGATGACATACAGCAATTATGCCAGCAAATTGAAGAATTGGATAGTTCATCTGAAGGAAATCCAAAGGACATATCTCTTGAGGAAAATTGTGATGCAGACCCCACCAGTGGTGATGAAATTGAAAAGGCTGAGGAATGCTGCGGAAAAACATTGGGCATTTCAGTAAATTCATGTAATCAATCTCCAGTACTTGCTGGACCACAGTTGTCTGAGTCTCCAAAATTCAGCAAAATTCAAAGGAAAAGTTTGGCTATTTCATCAAGTTATCTTGGAAGTTGGAACAATGTGGCAGAGAGTTCAACTTTCAGTAACGATGTGTTGAACAAACCATTTAAACAAGACAAGCACGTGCAATCCTCGTTACAGTCTAGCAAGGTTGAGTCCTTGGCAGCAAGCCTTCAGAAGGGACTACAGATTATTGACTATCACCAGCATAACTCAGCACTGAACAAATCTTCAACTTCCTTCTCCTTTGAGCACTTAACTTTGACACCTTGTCCAGACATTGACAAGGCTGAATCTTGTGACCAAACAATACCACAGAAAGCTTACAGTGAAGAAGTAGGTTCTTTCCTTTGTGCATCATGCCGGACTAAACTATCTAATCAGGATTCCAGTGTGGTCCAATTAGCATTTGGAGAATGTAATGGCAAAAACATCATAAAAGAGAAGGAGCTCGAGATTGTTTGCAAGGAGCAAGCAGCTAGAATTGAGCAACTAAATCAGTTGGTGGAGAAATTGAAAGGAGAGAGAGATCCGAACTCAATTACTGTGTATAACTCGATGACAGATGAAGAAAAGCTTCTAAGGGAATTTTCCTCAAATGGTCATTTGCCATGTATTATGGAAGAAAAATGTGAAATTAAAGAAGTTCAGGAAGAGTTAGGCCAAAAGGACATCACTTTTGATTCAACTGAGAAGGAGTCACTTCTTGAGGAAATTCAGAATCTAAGGAGCAAGCTGCAGTCATGTAGTGATGCACCAGTTAAAAAATCTACTGACAAACTAAGATCTTCTTTGATGTCAAGATCCATACAACTGCAAAAAAGCGGGGTATTTTCTTATGATAATGGCAACGAAGAGCTAGAGAATGAAAGACAGAGATGGACAGAAATGGAAAGTGAGTGGATTTGTCTTACTGATGAACTTAGAGCTGATCTTGAGTCTTATCGCCAACATACTGAGAGGTTGGAGATGGAACTGAAGTCAGAAAAGAAGTGCGTGGCAGAAATAGATGATGCGCTAAAGAGAGCAGTTATGGGAAATGCTAGAATGGTGGAACACTATGCTGATCTACAAGAAAAATACGATGATTTGTTTGCGAAACACGATGCCATAATGGAAGGGATAGCAGAAGTGAAGAAGGCAGCAGCGAAAGCCTCAAAAAAAGGTCACGCACGCTTTGCCAAATCTCTTTCCGCTGAGCTTTCTGCGTTGAGGGTGGAAAGAGAAAGGGAATCAAAATTATTGAAAAAGGAGAACCAGAACTTGAAGACTCAACTTCGAGAGACTGCAGAAGCTGTTCAGGCTGCTGGAGAGCTACTTGTTAGACTAAGAGAAGCTGAACATGCAGCAGCTTTTGCAGAGGAGAACTTTGCAAATGTGCAACAAGATAATGAAAATTTGAAGATGCAAATTGAGAAGCTGAAAAGAAAACACAAGACAGAGATTAATACCATGAAGCAGTACATTACAGAGAGCAAATTACCTGAGTCTGCACTGCAACCACTGTATAGAGAGGATTCTGATTTGGCACACAATGCAGCTTCCTCCTATTCATACGATGATCAGGCATGGAGATCAGAATTTGGAGCAATATATCAGGAGCATTACTAA 3324 0.407 MRQKKNNTDSSGFLGSISSNFLRSISSSNRKPTSSSFTNHKFLKSDVENTPPTHPNISLNHHQQLKPTDPFPQSNSHVKVVVRIKPENINGKEGDWEIKKVSSDALCIGDIKFMFDEVFDGNSNQEDVFQSVGVPLVRNALAGYNTTILSFGQSGSGKTYTMWGPPSAMVDESSSSSQLGIVPRIFRMLLSELERERLASDQKQFNYQCRCSFLEINNERIGNLLNPIQQNLEMKDDSRNAPYIENLVEEYITNYDDVAQILIKGLSRRKKEATSLNSNSSGSHIIFTFVIESLCKGTTKDIFSSSKVSRISLIDLAGLDRDEVGDVGSQCARENRQVEKSVSQLEHLVDALTKKSQSGKNGDILHSDSCLTRLLQEPLGGNAKLSVICSISPNNKSNDKTLRTLRFGEQVRSIRNEPVINVIKETDVDLSNNIRHLKEELIRAKTDIHSSAGSKDGYFQGQNVRESLNQMRVSLNRSLLLSNIDCDTIERVNVSEDDIQQLCQQIEELDSSSEGNPKDISLEENCDADPTSGDEIEKAEECCGKTLGISVNSCNQSPVLAGPQLSESPKFSKIQRKSLAISSSYLGSWNNVAESSTFSNDVLNKPFKQDKHVQSSLQSSKVESLAASLQKGLQIIDYHQHNSALNKSSTSFSFEHLTLTPCPDIDKAESCDQTIPQKAYSEEVGSFLCASCRTKLSNQDSSVVQLAFGECNGKNIIKEKELEIVCKEQAARIEQLNQLVEKLKGERDPNSITVYNSMTDEEKLLREFSSNGHLPCIMEEKCEIKEVQEELGQKDITFDSTEKESLLEEIQNLRSKLQSCSDAPVKKSTDKLRSSLMSRSIQLQKSGVFSYDNGNEELENERQRWTEMESEWICLTDELRADLESYRQHTERLEMELKSEKKCVAEIDDALKRAVMGNARMVEHYADLQEKYDDLFAKHDAIMEGIAEVKKAAAKASKKGHARFAKSLSAELSALRVERERESKLLKKENQNLKTQLRETAEAVQAAGELLVRLREAEHAAAFAEENFANVQQDNENLKMQIEKLKRKHKTEINTMKQYITESKLPESALQPLYREDSDLAHNAASSYSYDDQAWRSEFGAIYQEHY* 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0552 1107 Coils Coil 1007 1062 - -
Pvu6g0552 1107 Coils Coil 972 1003 - -
Pvu6g0552 1107 Coils Coil 335 355 - -
Pvu6g0552 1107 SMART kinesin_4 75 422 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu6g0552 1107 Coils Coil 492 512 - -
Pvu6g0552 1107 ProSiteProfiles Kinesin motor domain profile. 77 414 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu6g0552 1107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 446 IPR027417 -
Pvu6g0552 1107 Coils Coil 719 746 - -
Pvu6g0552 1107 Coils Coil 851 871 - -
Pvu6g0552 1107 Coils Coil 803 823 - -
Pvu6g0552 1107 Pfam Kinesin motor domain 105 414 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu6g0552 1107 PANTHER KINESIN-RELATED 47 1089 IPR027640 GO:0003777|GO:0007018
Pvu6g0552 1107 PANTHER KINESIN MOTOR DOMAIN PROTEIN 47 1089 - -
Pvu6g0552 1107 PRINTS Kinesin heavy chain signature 143 164 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu6g0552 1107 PRINTS Kinesin heavy chain signature 274 291 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu6g0552 1107 PRINTS Kinesin heavy chain signature 310 328 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu6g0552 1107 PRINTS Kinesin heavy chain signature 364 385 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu6g0552 1107 Coils Coil 876 896 - -
Pvu6g0552 1107 MobiDBLite consensus disorder prediction 44 74 - -
Pvu6g0552 1107 Gene3D Kinesin motor domain 71 424 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0552 Pvu-Chr6 16745012 16751017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0552 114 440 Calmodulin-binding Proteins AT5G65930 31.722 1.76e-39 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0552 K10400 - gmx:100817066 1722.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0552 6 16745012 16751017 Pvu8g2835 8 58382830 58388599 PCT