Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0548 ATGGCAGAAGAAATAGGGTGCAGAGCTCTGGAGATAGCGATTTCATTACTTTGGGAAGCTGTCAAAAAGATGAAAGGTCTCCGAGAAGAAGTTCAAAATATTGAAAATGAACTTGTACGCTTGCGAAATTCCATCGATAAAGCAGATGAAGAGGCTGAAGCTGAAAGAGATGACCGTCTGCGCGAAGAGAAGAAGATAACGTCGATGCGGCTGAGAAGAGAACTTTTTCTCAAGGAAGATGTGATTGAAGAATATGACATCCGTATTGGACACGTTCCTCCACCGGCAGCTTCATTCTCTAAGGCTGTTCACTGCATCCGAACTCTGATCCCTCGAATTCAAATAGCATATAAGGTTGAAGATATTAAAAGCAAAACTAGTCATCAAGAATTGGGATCAAGCACTTCTGTAGAAAATCAAAGGAATTCATCGCACCACCATCTATCTGATCTGGAGACGCAAGAGGAGGTTTTTGGCCTTGTTGAACCTACAAAAATATTGAGAGGTTGGTTGAAAGAGGGACGAGAAGAAGGAGAAGAACGCACTGTGATTACGGTTGTGGGTATTCCAGGAGTTGGAAAAACCACTCTTGCCAAGCATGTTCTTTACAAGGTCCATGACGACTTTGTGTGCCACGCACTGATCAGAGTCTCTCAATCTTACACTGTAGAAGGACTGTTAAGGGATATGATACGCAAACTTTACAAAGAAAGAAAGGAAGATACACCTCCTAAAATTTCTAAGATGGATGAAGACTCCTTGAAAGAAGAAGTCAGAGATTGCTTGCGGAAGAAAAGGTATGTTGTCTTATTTGATGACGTATGGAATGAAAATTTTTGGGATGACATTCAATCTGTTTTGATTGATGATAAAAATAAAAGTAGGATAATAATCACAACAAGGAACGTGAAAGTTGCAGACTTTTGTAAGACTTCTTCTATTGTTCAAGTATATAACCTTGAAGAACCTCTAAGTCCAGAAGAATCTTTGAAATTGCTCCACAAGAAGGCACGTTATGGTTCTGACGGACATTGTCCCCATGAACTTAAAAATGTGTCTTTTGAAATTCTTAGGAAATGTAAAGGTTTACCTCTAGCAATTGTGGTCGTTGGCGGTCTTTTGAGTCAACGAAAGGAACAAAGTGCCCTTGAATGGACAAAGTTTAGTGAAGAGTTGAAGAGGAATCGTAACTTAAACGGTATAACAGACATTATAGGTTTCAGTTATAATGATTTGCCAATACATCTCAGATCATGTTTATTGTATTTCGGAATGTATCCGGAAGGCTATGAAATTGAATCTGATAGATTGGTTAAGCAGTGGGTAGCTGAGGGTGTTGTTACACCTGATACCGAGAAATCTTTAGAAGAAGTTGCAAATGAATATTTATTAGGCTTGGTCCATAGAAGTTTGGTGCAAGTGTCTTCAATTTCCTTCGAAGAAAAATTTATAAAATGTCGTGTTCATGATTTAATACACGTCATGATCCGTAGAAAAATCAAGAATACTTGTTTTGGCGAGTATATTGGTGGTGGTGGGGATGATCAATCTGAGTCAAGTGGGTTGGTTCGACGTCTGACAATTGCAACCAATGATGTAATTAGAAGTACTGAAACCTCACTCATTCGGTCAATTATAATCATTCCAGGAAAACAAGAAGAATCATGGTTTGTGCAATTGGAGAGAAAAATTCTTAAAGATGATATGTCATTGAAGGTACTTGATTATGAAGATTCTGCATTACCTCGTGTTCCTAAAAAGTTGGGGAATTTAATCTACCTGAGGTATTTAAGCTTTAGGAGAACACTGATAAAAACTCTTCCAAAATCCATTGGTAAGCTCCTGAACTTGGAGACCTTGGATATACGAGAAACAAAAGTGTGTAAGATTCCAAAGGAGACCACCAAGCTTCGAAAGTTACGGCATCTTCTGACACCTAACTGTGCATATTCTTCAATTGAATGGAAGGATATTGGAGGCATGACAATGCTACAAAAGATACCACAAGTGCGTGTGGAGTTTGATGAAGTGGCGATTAGAGAGGTGGGAAAGCTAAAGCAGTTAAGGGATCTGAGGGTGCTTTGTTTCACCGGAGAGCACAACAATTTTCTTTGCTCTTCAATAAAGGAGATGGAACACTTGCAGGCACTACGCATTGAAACATCTGGTCATCACCGCAGTGAAGTAGTCGACTTGAACATTACGTTACGAAATTCTAAACTTAAGAAGCTTTTCCTTGATATGAAGTTAGAAAGGTTACCCAATTGGATTCCTCAACTCCATAATCTTGAGAGATTGACCTTGCGCCTCTCTGACTTAACCAATGATCCGTTGGAATCACTAAAAGATATGCCTTGTTTGACGGTTCTCTCTTTAACCTACGCTTATGAAGGTCAAATATTGAGTTTTCAACGTGGAGGGTTTCCGAAACTAAGGAAGCTAATTCTCTCAAATCTTTGGAAATTGAATTCGATCCGTATTGATGACACAGCACTGCAGTCTTTGGAATATTTTGAGTTGACATGCCTTGATGAACTCAAAACTGTACCCGAGGGCTTTCAATCTCTGGAGAAACTTAAATTTCTTGATCTCCTTTCTATGCCAACTGAATTTGTGGAGGAAATTGATCCCATTGGTAAAAACAAGCACTGGAGCATCAATTATGGGCTATAG 2673 0.3913 MAEEIGCRALEIAISLLWEAVKKMKGLREEVQNIENELVRLRNSIDKADEEAEAERDDRLREEKKITSMRLRRELFLKEDVIEEYDIRIGHVPPPAASFSKAVHCIRTLIPRIQIAYKVEDIKSKTSHQELGSSTSVENQRNSSHHHLSDLETQEEVFGLVEPTKILRGWLKEGREEGEERTVITVVGIPGVGKTTLAKHVLYKVHDDFVCHALIRVSQSYTVEGLLRDMIRKLYKERKEDTPPKISKMDEDSLKEEVRDCLRKKRYVVLFDDVWNENFWDDIQSVLIDDKNKSRIIITTRNVKVADFCKTSSIVQVYNLEEPLSPEESLKLLHKKARYGSDGHCPHELKNVSFEILRKCKGLPLAIVVVGGLLSQRKEQSALEWTKFSEELKRNRNLNGITDIIGFSYNDLPIHLRSCLLYFGMYPEGYEIESDRLVKQWVAEGVVTPDTEKSLEEVANEYLLGLVHRSLVQVSSISFEEKFIKCRVHDLIHVMIRRKIKNTCFGEYIGGGGDDQSESSGLVRRLTIATNDVIRSTETSLIRSIIIIPGKQEESWFVQLERKILKDDMSLKVLDYEDSALPRVPKKLGNLIYLRYLSFRRTLIKTLPKSIGKLLNLETLDIRETKVCKIPKETTKLRKLRHLLTPNCAYSSIEWKDIGGMTMLQKIPQVRVEFDEVAIREVGKLKQLRDLRVLCFTGEHNNFLCSSIKEMEHLQALRIETSGHHRSEVVDLNITLRNSKLKKLFLDMKLERLPNWIPQLHNLERLTLRLSDLTNDPLESLKDMPCLTVLSLTYAYEGQILSFQRGGFPKLRKLILSNLWKLNSIRIDDTALQSLEYFELTCLDELKTVPEGFQSLEKLKFLDLLSMPTEFVEEIDPIGKNKHWSINYGL* 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0548 890 PANTHER - 31 864 - -
Pvu6g0548 890 Gene3D - 415 499 IPR036388 -
Pvu6g0548 890 Gene3D - 8 131 - -
Pvu6g0548 890 MobiDBLite consensus disorder prediction 128 142 - -
Pvu6g0548 890 CDD RX-CC_like 26 125 IPR038005 -
Pvu6g0548 890 PRINTS Disease resistance protein signature 183 198 - -
Pvu6g0548 890 PRINTS Disease resistance protein signature 261 275 - -
Pvu6g0548 890 PRINTS Disease resistance protein signature 360 374 - -
Pvu6g0548 890 PRINTS Disease resistance protein signature 612 628 - -
Pvu6g0548 890 Pfam NB-ARC domain 170 410 IPR002182 GO:0043531
Pvu6g0548 890 Gene3D - 324 413 IPR042197 -
Pvu6g0548 890 Coils Coil 17 65 - -
Pvu6g0548 890 PANTHER DISEASE RESISTANCE PROTEIN RP 31 864 IPR044974 GO:0006952
Pvu6g0548 890 SUPERFAMILY L domain-like 488 871 - -
Pvu6g0548 890 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 423 IPR027417 -
Pvu6g0548 890 Gene3D Ribonuclease Inhibitor 553 878 IPR032675 -
Pvu6g0548 890 Gene3D - 138 317 IPR027417 -
Pvu6g0548 890 MobiDBLite consensus disorder prediction 127 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0548 Pvu-Chr6 16711093 16713765 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0548 184 384 WRKY Transcription Factor Family AT5G45050 27.363 2.37e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0548 K13457 - gmx:100806153 792.727