Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0547 ATGGAAGATGAACTACGGGGGAAAGTTTCGGAGCTTGCGATTTCAATACTTTGGGAAGCTATCAAAAAGATGAGAGGCCTCCCAGAAGAAGTTCAAAAGATTAAATATGAACTTGTACGCTTGCGAGATTCCATCGATAAAGAAGATGAAGAGGCTGAAGCTGAAAGAGATGACACTCGACGTCCAGAAAAGAAGAGAAGGTTGATGCAGTTGAGAAAAGTATCTTTTCTCGAGGAAGATGTGATTGACTCATATAACATCCGTATTGGAGATGTTCCTCCAACGGTACCTTTATTATCTAAGGCTGTTCACTACATCCGAACTCTGATCCCTCGACTTCAAATATCAAATAAGATTGAAGATATTAAAGGGCAATATCCACCAAGATCAAGCACTTCTGGAGAAAATAAAAGGAATCCATCGCACCAACGTCGATGGGATCCTCTGGAGACGCAAGAGGAGGTTGTTGGCCTTGTTGAACCAACAAACATACTGGAACGTTTGTTGAAAGACGGACCAAAAGAACGCACTGTGATTTCTGTTGTGGGTATTCCAGGAGTTGGGAAAAGCACTCTTGCCAAGCATGTTTTTGACAAGTTCCATGCAGACTTTGAATGCCATGCAGTGATCAGAGTCTCTCAAACCTACACTGTAGAAAAACTGTTGATGGATATGATACAGCAGCTTTGCAAGAAAGAAACTCCTTCTAATATTTCTACGATGAGTCTATACCAGTTGACAACAGAAGTCAGAGATTGCTTGCACAAGAAGAGGTATGTTATCTTATTTGATGACGTGTGGAATGAAAACTTTTGGGATGACATTCAATCTGCTTTGATTGATGATAAAAATAAAAGTAGGATAATAATCACAACAAGGCTCGACGAACTTGGGTACTTAGGATCTACTTTGGTTGAAGTATATAAGCTGGAAGAACCGTTAAGTGAAGATGAATCTTTGAGATTGCTCCACAAAGCATTTAAGTATGGTTCCGCTGGAAGCTGTCCAAAAGAACTTAAACATATATCTCTTGAAATTGTGAGGAAGTGTAAAGGTTTACCTCTAGCAGTTGTGGTCGTTGGTGGTCTTTTGGCTCAAAAGGAACAAAGTGCCTATCAATGGAGACTGTTTAGTGAAGAGTTCAATCGTAACTTAAACGATATAACAGAAATTATAGGTTTGAGTTATGATTATTTGCCATTCCATCTCAAATTATGTTTATTGTATTTCGGAATGTATCCGAAAGGCTATGAAATTGAATCTGATAGATTGGTCAGGCAGTGGGTAGCTGAAGGATTTGTTACACCTGATGATACCCAGAAATCTTTAGAAGAAGTTGCACATGAATATTTGTTAGGGTTGGTCAATAGAAATTTGGTGCAAGTGTCTTCATTTTCCATGAAAGGAAAAGTTAAAAAATGTTGTGTTCATGATTTAATACACGACATGATCCGTAGAAAAGTCAAGAATACTTGTTTTGGCGAGTTTATTGGTGCTGGGCATGATCAATCTGAGTCAAGTGAGTTGGTTCGACGTCTGACAATTGCAACCAATGATGTAATTAGAAGTACTGAAAACTCACTCATTCTGTCAATTATAATCACCATTCCAGAAAAACAAGAAGACTCATGGTTTGTGCAATTGGAAAGCAAAATTCTTGAAGACAATATGCCATTGAAGGTACTTGACTATGAAGATTCTGGATTACCTTTTGTTCCTAAAATGTTGGGGAATTTAATCCACCTGAGGTATTTAAGCTTTAGGGGAACACAGATAGAAAGTCTTCCAAAATCCATTGGTAAGCTCCTGAACTTGGAGACCTTGGATATACGAGAAACAAAAGTGTGTAAGATTCCAAAGGAGATCACCAAGCTTCAAAAGTTACGATATCTTCTGACACCTAACTGTGCATCTTCTTCAATTGAATGGAAGGATATTGGAGGCATGACAATGCTACAAAAGATACCACAAGTGCGTGTGGAGTTTGATGAAGTGGCGATTAGAGAGGTGGGAAAGCTAAAGCAGTTAAGGGATCTGAGGGTACTTTGTTTCAGCGGAGAGCACAACAATTTTCTTTGCTCTTCAATAGAGAAGATGGAACACTTGCAGGCACTACGCATTGAAACATCTGGTCATCACCGCAGTGAAGTAGTCGACTTGAACATTACGTTACGAAATTCTAAACTTAAGAAGCTTTTCCTTGATATGAAGTTAGAAAGGTTACCAAATTGGATTCCTCAACTCCATAATCTTGAGAGATTGACCTTACGCCACTCTGACTTAACCAATGATCCGTTGAAATCACTAAAAGATATGCCTTGTTTGACGGTTCTCTCTTTAACCCACGCTTATGAAGGTCAAACTTTGCATTTTCAACGTGGAGGGTTTCGGAAACTAAGGAAGCTAATTCTCTCAAATCTTTGGAACTTGAATTCGATCCTTATTGATAAGAGAGCACTTTATTCTTTGGAATATTTTGAGTTGACATGCCTTGATAAACTCAAAAGTGTGCCTGTGGGCATTCAACATCTGAAGAAACTTAAATGTCTTGATGTCGCTTCTATGCCAACTGAATTTGTGGACAAAATTGATCGCATTGGTAAAAAGAAGCACTGGAGCATCAATTATGGCTATATGTGA 2640 0.3867 MEDELRGKVSELAISILWEAIKKMRGLPEEVQKIKYELVRLRDSIDKEDEEAEAERDDTRRPEKKRRLMQLRKVSFLEEDVIDSYNIRIGDVPPTVPLLSKAVHYIRTLIPRLQISNKIEDIKGQYPPRSSTSGENKRNPSHQRRWDPLETQEEVVGLVEPTNILERLLKDGPKERTVISVVGIPGVGKSTLAKHVFDKFHADFECHAVIRVSQTYTVEKLLMDMIQQLCKKETPSNISTMSLYQLTTEVRDCLHKKRYVILFDDVWNENFWDDIQSALIDDKNKSRIIITTRLDELGYLGSTLVEVYKLEEPLSEDESLRLLHKAFKYGSAGSCPKELKHISLEIVRKCKGLPLAVVVVGGLLAQKEQSAYQWRLFSEEFNRNLNDITEIIGLSYDYLPFHLKLCLLYFGMYPKGYEIESDRLVRQWVAEGFVTPDDTQKSLEEVAHEYLLGLVNRNLVQVSSFSMKGKVKKCCVHDLIHDMIRRKVKNTCFGEFIGAGHDQSESSELVRRLTIATNDVIRSTENSLILSIIITIPEKQEDSWFVQLESKILEDNMPLKVLDYEDSGLPFVPKMLGNLIHLRYLSFRGTQIESLPKSIGKLLNLETLDIRETKVCKIPKEITKLQKLRYLLTPNCASSSIEWKDIGGMTMLQKIPQVRVEFDEVAIREVGKLKQLRDLRVLCFSGEHNNFLCSSIEKMEHLQALRIETSGHHRSEVVDLNITLRNSKLKKLFLDMKLERLPNWIPQLHNLERLTLRHSDLTNDPLKSLKDMPCLTVLSLTHAYEGQTLHFQRGGFRKLRKLILSNLWNLNSILIDKRALYSLEYFELTCLDKLKSVPVGIQHLKKLKCLDVASMPTEFVDKIDRIGKKKHWSINYGYM* 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0547 879 Gene3D Ribonuclease Inhibitor 666 870 IPR032675 -
Pvu6g0547 879 Pfam NB-ARC domain 163 406 IPR002182 GO:0043531
Pvu6g0547 879 Pfam Rx N-terminal domain 14 90 IPR041118 -
Pvu6g0547 879 Gene3D - 313 400 IPR042197 -
Pvu6g0547 879 PRINTS Disease resistance protein signature 178 193 - -
Pvu6g0547 879 PRINTS Disease resistance protein signature 253 267 - -
Pvu6g0547 879 PRINTS Disease resistance protein signature 350 364 - -
Pvu6g0547 879 PRINTS Disease resistance protein signature 600 616 - -
Pvu6g0547 879 Coils Coil 31 58 - -
Pvu6g0547 879 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 410 IPR027417 -
Pvu6g0547 879 Gene3D - 402 487 IPR036388 -
Pvu6g0547 879 Gene3D Ribonuclease Inhibitor 535 658 IPR032675 -
Pvu6g0547 879 PANTHER - 46 853 - -
Pvu6g0547 879 Gene3D - 7 119 - -
Pvu6g0547 879 PANTHER DISEASE RESISTANCE PROTEIN RP 46 853 IPR044974 GO:0006952
Pvu6g0547 879 MobiDBLite consensus disorder prediction 121 147 - -
Pvu6g0547 879 Gene3D - 147 300 IPR027417 -
Pvu6g0547 879 SUPERFAMILY L domain-like 476 859 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0547 Pvu-Chr6 16692492 16696742 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0547 154 859 WRKY Transcription Factor Family AT5G45050 21.791 2.39e-13 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0547 K13457 - gmx:100809266 812.757