Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0546 ATGGCAGAAACTGCGATGTCCTTTGCTCGCCAGTATATGCTCCCAAAACATTTTGAAGCTGTCAAAATGATGAGAGATCTCCCAAAAGAAGTTGCAGAGATTACAGAAGAACTTGGAAGCTTGCTAGATTTTATCGATGATGTAGATAAAGTGGCTGAAGCTGAAGAAGATAACAAGAGGCGTGAAAGAATGAAGGAAAGGTTGATGCGGCTGAGAGAAGCAGCTTTTCGCATGGAAGATGTGATTGATGAATATTGGATCCGTGTTAGAGAAAAACAACCTCAAGATGGTCCTCGATGGGTAGCTTTACTCTCTAAGGCTGTTCACTACATCAAAATCCTGATCCCTCGACTTCAAATAGCATATAAGATTCAGGATAACAAATCAGTTGTTCGTGATGAAAAAGGTAGTTTTCAAAGCCAATATTCTTTAGAAACAAGACTAAACAGTTCTGGAGAAAATCGAAATGTCACATTGCACCAACTTCAAATGGATCCTCTTCTTATTAAGGAAGAGGAGGTTGTTGGCCTTGCTGGACCTACAAAGATATTGAAAGATTGGTTGACAGAGGGACGAGAAGAACGCACTGTGATTTCTGTCGTTGGTATTCCAGGAGTTGGAAAAACCACTCTTGCCAAGAGTGTTTTTGACAAGGTCCATGACGACTTTGTGTGCCATGCAGTGATCACAGTCTCTCAATCCTACACTGTAGAAGGACTGTTGAGGGATATGATACACAAACTTTGCAAAGAAAGAAAGGAAGATCCACCTTCTAATATTTCTAAGATGGATCGAGGCTCCTTGGAAGAAGAAGTCAGAGATCGCTTGCACAAGAAGAGGTATGTTATCTTATTTGATGACGTGTGGAATGAAAACTTTTGGGATGACATTCAATCTGCTTTGATTGATGATAAAAATAAAAGTAGGATAATAATCACAACAAGGCACCAGATGGTTGCGGTGTTCTGTAAGAAATCTTCTTTTATTGAACTGCATAAGCTGGAAGAACCTTTAAGTGAAGATGAATCTTTGAAATTGCTCCACAAAAAAGCATTTAAGTATGGTTCCGCTGGAGGCTTTCCAGAAGAACTTAAAGACTTATCTCTTGAAATTGTGAGGAAGTGTAAAGGTTTACCTCTAGCAATAGTGGTCGTTGGTGGTCTTTTGGCTCAAAAGGAACAAAGTGCCTCTCAATGGAGACTGTTTAGTGAAGAGTTCAATCCTAACTTAAACGATATAACAGAAATTATAGGTTTAAGTTATGATAGTTTGCCAATCAATCTCAGATCATGTTTATTGTATTTCGGAATGTATCCGAAAGGCTATGAAATTGAATCTGATAGATTGGTTAGGCAGTGGGTAGCTGAAGGATTTGTTACACCTGATACCCCGAAATCTTTAGAAGAAATTGCACATGAATATTTATTAGGGTTGGTCCATAGAAATTTGGTGCAAGTGTCTTCATTTTCCATGGAAGGAAAAGTTAAAAAATGCCGTGTTCATGATTTAATACATGGCATGATCCTTAGAAAAGTCAAGGATACAAGATTTTGTGAGTATATTGATGGTGGGCATGATAAATCTGAGTCAAGTGGGTTGGTTCGACGTCTAACAATTGCAACCAATGATGTAATTAGAAGTACTGAAACCTCACTCATTCGGTCAATTATAACCATTCCAGGAAAACAAGAAGAATCATGGTTTGTCCAATTGGAAAGCAAAATTCTTAAAGATGATATGCCATTGAGGGTACTTGATTATGAAGATTCTGGATTACCTTGTGTTCCTAAAAAGTTGGGGAATTTAATCCACCTGAGGTATTTAAGCTTTAGGGGAACACAGATAGAAAGTCTTCCAAAATCCATTCGTAAGCTCCTGAACTTGGAGACCTTGGATATACGACAAACAAAAGTGTGTAAGATTCCAAAGGAGATCACCAAGCTTCAAAAGTTACGATATCTTCTGACACCTAACTGTGCATCTTCTTCAATTGAATGGAAGGATATTGGAGGCATGACAATGCTACAAAAGATACCACAAGTGCGTGTGGAGTTTGATGAAGTGGCGATTAGAGAGGTGGGAAAGCTAAAGCAGTTAAGGGATCTGAGGGTGCTTTGCTTCAGCGGAGACCACAACAATGTTCTTTGCTCCTCAATAAAGAAGATGGAACACTTGCAGGCACTACGCATTGAAACATCTGGTCATCACCGCAGTGAAGTAGTCGACTTGAACATTACGTTACCAAATTTTAAACTTAAGAAGCTTTTCCTTGATATGAAGTTAGAAAGGTTACCAAATTGGATTCCTCAACTCCATAATCTTGAGAGATTGACCTTACGCCACTCTGACTTAACCAATGATCCGTTGAAATCACTAAAAGATATGCCTTGTTTGACGGTTCTCTCTTTAACCCACGCTTATGAAGGTCAAACTTTGCATTTTCAAGCTGGAGGGTTCCAGAAACTAAGGAAGCTAAATCTCTCAAATCTTTGGAACTTGAATTCGATCCATATTGATGACACAGCACTGCCTTCTTTGGAATATTTTGAGTTGACATGCCTTGATGAACTCAAAACTGTACCTGTGGGCATTCAGTATCTGAAGAAACTTAAATTTCTTGATGTCCCTTCTATGCCAATGGAATTTGTGGAGGAAATTGATCGCATTGGTAAAAAGCAGCACTGGAGCATCAATTATGGCTATATGTGA 2709 0.3887 MAETAMSFARQYMLPKHFEAVKMMRDLPKEVAEITEELGSLLDFIDDVDKVAEAEEDNKRRERMKERLMRLREAAFRMEDVIDEYWIRVREKQPQDGPRWVALLSKAVHYIKILIPRLQIAYKIQDNKSVVRDEKGSFQSQYSLETRLNSSGENRNVTLHQLQMDPLLIKEEEVVGLAGPTKILKDWLTEGREERTVISVVGIPGVGKTTLAKSVFDKVHDDFVCHAVITVSQSYTVEGLLRDMIHKLCKERKEDPPSNISKMDRGSLEEEVRDRLHKKRYVILFDDVWNENFWDDIQSALIDDKNKSRIIITTRHQMVAVFCKKSSFIELHKLEEPLSEDESLKLLHKKAFKYGSAGGFPEELKDLSLEIVRKCKGLPLAIVVVGGLLAQKEQSASQWRLFSEEFNPNLNDITEIIGLSYDSLPINLRSCLLYFGMYPKGYEIESDRLVRQWVAEGFVTPDTPKSLEEIAHEYLLGLVHRNLVQVSSFSMEGKVKKCRVHDLIHGMILRKVKDTRFCEYIDGGHDKSESSGLVRRLTIATNDVIRSTETSLIRSIITIPGKQEESWFVQLESKILKDDMPLRVLDYEDSGLPCVPKKLGNLIHLRYLSFRGTQIESLPKSIRKLLNLETLDIRQTKVCKIPKEITKLQKLRYLLTPNCASSSIEWKDIGGMTMLQKIPQVRVEFDEVAIREVGKLKQLRDLRVLCFSGDHNNVLCSSIKKMEHLQALRIETSGHHRSEVVDLNITLPNFKLKKLFLDMKLERLPNWIPQLHNLERLTLRHSDLTNDPLKSLKDMPCLTVLSLTHAYEGQTLHFQAGGFQKLRKLNLSNLWNLNSIHIDDTALPSLEYFELTCLDELKTVPVGIQYLKKLKFLDVPSMPMEFVEEIDRIGKKQHWSINYGYM* 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0546 902 Gene3D Ribonuclease Inhibitor 685 892 IPR032675 -
Pvu6g0546 902 Pfam Rx N-terminal domain 11 93 IPR041118 -
Pvu6g0546 902 PANTHER DISEASE RESISTANCE PROTEIN RP 42 876 IPR044974 GO:0006952
Pvu6g0546 902 Coils Coil 51 81 - -
Pvu6g0546 902 Pfam NB-ARC domain 184 422 IPR002182 GO:0043531
Pvu6g0546 902 Gene3D - 161 330 IPR027417 -
Pvu6g0546 902 Gene3D Ribonuclease Inhibitor 547 679 IPR032675 -
Pvu6g0546 902 Gene3D - 337 425 IPR042197 -
Pvu6g0546 902 Gene3D - 5 121 - -
Pvu6g0546 902 PRINTS Disease resistance protein signature 197 212 - -
Pvu6g0546 902 PRINTS Disease resistance protein signature 275 289 - -
Pvu6g0546 902 PRINTS Disease resistance protein signature 375 389 - -
Pvu6g0546 902 PRINTS Disease resistance protein signature 623 639 - -
Pvu6g0546 902 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 435 IPR027417 -
Pvu6g0546 902 PANTHER - 42 876 - -
Pvu6g0546 902 SUPERFAMILY L domain-like 500 883 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0546 Pvu-Chr6 16682590 16685934 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0546 197 882 WRKY Transcription Factor Family AT5G45050 23.119 1.44e-13 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0546 K13457 - gmx:100809266 1001.5