Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0532 ATGCCACTGAGAAAAGGTTGCAGTTTTTTTAATGAGCCTTGTCTTGTTGCCAAGAAATTCTTGGCTAGACCTCAGCATGAGGGCGTTGGAGCTGTTGTTAGAAGAAGCATAGGAAGGTTTGAGCTCAAGTACTTTGATCCCTTCCTTATGTTGGATGAATTCTCAGTTACTGCTCCTGCTGGTTTTCCTGATCATCCTCATAGAGGCTTTGAGACAGTCACGTACATGTTGCAGGGAGCTATCACGCATGAAGATTTTGAAGGACACAGGGGGACTGTAGAAGCTGGTGACTTGCAATGGATGACTGCTGGGAGAGGGATTGTGCACTCAGAAATGCCTGTTGCTCAAGGAACCCAAAAGGGTCTTCAATTGTGGATCAACCTTGCTTCCAAATATAAAATGATTGAACCAAGGTATCAAGAAGTGTTGAGTAAGGACATAGCAGAAGCTGAGGATGATGATGGTGTGAAGGTAAGAGTTATAGCTGGTGAAGCAGTAGGGATAAAGTCTCCAATCTTCACAAGGACTCCAACCATGTTCTTGGACTTCTCTCTCAAACCAGGAGGTCACTTGCAGCAACCTATACCAAAATCTTGGAATGCTTTTGTGTATATATTGGAAGGAGAGGGTATCTTTGGAAGCATGAAATCTCAACCTTCAAATTCTCACCATATTCTTCTTCTTGGTCATGGTGATGGCCTAGAGGCATGGAACAAATCTTCTAAGCTCCTTAGGTTCATTTTGGTTGGAGGAGAACCTTTGGGGGAACCTATAGTGCAATCTGGACCCTTTGTGATGAACACTCAAGAAGAGATTGACCAAACCATTGATGATTTTGAGAACTTTACAAACGGATTTGAGAAAGCAAGAGATTGGAGATCTGAAAACAAAATTAACTAA 900 0.4256 MPLRKGCSFFNEPCLVAKKFLARPQHEGVGAVVRRSIGRFELKYFDPFLMLDEFSVTAPAGFPDHPHRGFETVTYMLQGAITHEDFEGHRGTVEAGDLQWMTAGRGIVHSEMPVAQGTQKGLQLWINLASKYKMIEPRYQEVLSKDIAEAEDDDGVKVRVIAGEAVGIKSPIFTRTPTMFLDFSLKPGGHLQQPIPKSWNAFVYILEGEGIFGSMKSQPSNSHHILLLGHGDGLEAWNKSSKLLRFILVGGEPLGEPIVQSGPFVMNTQEEIDQTIDDFENFTNGFEKARDWRSENKIN* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0532 299 CDD cupin_pirin_N 31 128 - -
Pvu6g0532 299 CDD cupin_pirin_C 177 253 - -
Pvu6g0532 299 PANTHER PIRIN-RELATED 1 297 IPR012093 -
Pvu6g0532 299 Pfam Pirin C-terminal cupin domain 180 284 IPR008778 -
Pvu6g0532 299 Gene3D Jelly Rolls 27 280 IPR014710 -
Pvu6g0532 299 Pfam Pirin 33 126 IPR003829 -
Pvu6g0532 299 SUPERFAMILY RmlC-like cupins 16 294 IPR011051 -
Pvu6g0532 299 Gene3D Jelly Rolls 148 254 IPR014710 -
Pvu6g0532 299 PANTHER - 1 297 - -
Pvu6g0532 299 PIRSF Pirin 12 293 IPR012093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0532 Pvu-Chr6 16590397 16593793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0532 13 290 Calmodulin-binding Proteins AT3G59220 59.286 8.69e-123 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0532 K06911 - gmx:100815529 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0532 6 16590397 16593793 Pvu6g0532 6 16590397 16593793 ECH
Pvu6g0532 6 16590397 16593793 Pvu8g2832 8 58369887 58373049 PCT