Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0510 ATGGCATCTTCTTCAGACTCATGGATGAAGGAATATAATGAAGCTGTAAAACTTGCTGATGATATCACTGGCATGATTTCTGAACGTAGTTCATTTCCTGCTTCTGGACCAGAAACCCAGCGGCATGCATCTGCTATAAGAAGGAAGATCACGATATTAGGGACCAGGCTTGATAGCTTGCAATCTCTTTTGTCAAAGGTCCCTGCAAAAACTGAGAAGGAAATGAATCGTCGCAAGGACATGCTTGGAAATTTGAGGACTAAAGTTAACCAAATGGCTTCAACATTGAACATGTCAAACTTTGCAAATAGGGATAGTTTGCTTGGCCCAGAAATAAAATCAGATGCAATGAGCAGAACTGTTGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAGAACAAGACGATGGCCTTGAGAAATTGGAGGAGACTGTAATCAGTACAAAACATATTGCGTTGGCAGTCAATGAAGAGCTGGATCTACACACCAGGCTCATTGATGACTTAGACGAACATGTAGATGTTACAGATTCTCGGCTGAGGCGAGTGCAAAAGAACTTGGCAGTTTTGAACAAACGTACCAAGGGTGGTTGCTCCTGCTTGTGCATGCTTTTATCAGTGATCGGTATAGTGGTTTTGGTTGCTGTCATATGGCTGTTAATCAAATATTTGTAA 690 0.4188 MASSSDSWMKEYNEAVKLADDITGMISERSSFPASGPETQRHASAIRRKITILGTRLDSLQSLLSKVPAKTEKEMNRRKDMLGNLRTKVNQMASTLNMSNFANRDSLLGPEIKSDAMSRTVGLDNSGLVGLQRQIMKEQDDGLEKLEETVISTKHIALAVNEELDLHTRLIDDLDEHVDVTDSRLRRVQKNLAVLNKRTKGGCSCLCMLLSVIGIVVLVAVIWLLIKYL* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0510 229 PANTHER SYNTAXIN 1 224 IPR045242 -
Pvu6g0510 229 CDD SNARE_Qc 136 193 - -
Pvu6g0510 229 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 224 - -
Pvu6g0510 229 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 133 195 IPR000727 -
Pvu6g0510 229 Pfam SNARE domain 170 220 IPR000727 -
Pvu6g0510 229 Gene3D - 135 197 - -
Pvu6g0510 229 SMART tSNARE_6 128 195 IPR000727 -
Pvu6g0510 229 SUPERFAMILY SNARE fusion complex 124 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0510 Pvu-Chr6 16380924 16385067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0510 1 229 SNARE and Associated Proteins AT1G16240 72.414 6.03e-124 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0510 K08503 - gmx:100794038 415.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0510 6 16380924 16385067 Pvu6g0510 6 16380924 16385067 ECH
Pvu6g0510 6 16380924 16385067 Pvu8g2820 8 58266502 58270225 PCT