Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0493 ATGGAAGAAGCTACCTCCAATGATGACTCTAATATTGCACCAGTTACACATTCTTCTCTGGTCTTTGATGGGAAAAGACTTGTCCTGGATGAGATGGATTTCTTTGCTCAGAAGAAGAAGAAGAAGAAAAAAAATGTGGTTCCTGATGATGAAATGGTGCACCAAATGGAGCTTCATGTGGATACTAGGTTAGATCTCCTCACAAAGAGTTCCCCTACCATGGGAGAAGGATCATCGGAAGCAAAGGGTAATAAAAGAGATGATAAGTTTGCAGCTATGGTAGCTGAATTGCACCACATGAATGCTGAAAATCAACGCTTGAGAGATCAGGTTGATCAGGCGAATGATAAGTACCATGCTCTACACAATCAAGTTATGAAAATAATGGAGAAACGACAAAAGAATGAGGGTAAGAAAGCTGATATGATTCCAAGGCCATTCTTGGATATTGGAGTTGCTATGAAGGAAGAGAGTTCGCAGCAACATCCCAAGGGAAAACTGCAAGAAAGCAAGAATCAGAAGATCTGCACTACTGAGTTGGAGGCATCTGAAAAAGTTATTCCAAGGGTGTTCTCAAACAGTTCTTTCAAGGATGTTGACGAAGCATCAGAAACCATGTCAATGATCAAGAAAGCTCGAGTATCAGTTCGAGCAAGATCTGTTTCTTCTATGATTTCTGATGGATGTCAATGGAGAAAGTATGGGCAGAAGATGGCAAAAGGGAATCCATGTCCAAGAGCTTATTATCGTTGTTCAATGGGGACTGGTTGCCCAGTTCGGAAGCAAGTGCAAAGGAGTGCAGAGGATCAAAGTGTGTTGATCACAACATATGAAGGGCAGCATAATCATGTACTCCCTCCAGCTGCCAAAGCAATGGCATCCACCACATCTGCAGCTGCATCAATGCTTCTTTCAGGATCAATGCCAAGCTCAGATGGCCTTCTACACCCAAGCATATTAGAAAGTGCAACACTTCCATTTTCACAGAACTTAGCAACCCTCTCTGCTTCAGCTCCATTTCCAACTATCACTTTGGATCTCACTCAAAGTGCCACCAATACTTCCTCACAGCAGCTACCACAAGAGGCACCTCAGGATTCTCAACTCAGCCTCATTTCTCCACTTTTGGCACCAAATCTTTTTAACCACCAAACTAAGCTTTCTAGCTTACATGGCTCTCAGGGAACAGAACCTGCTTCTTTTGCTGACACAGTAAATGCAGCAACAGCTGCTATCACTACAGACCCCAAATTCAGTGCAGCTCTTATGGCAGCCATAACATCAATTATTGGAAGTTCACATCCAGTGGAGACTCAGCATTGCAATAACAAATAA 1335 0.4277 MEEATSNDDSNIAPVTHSSLVFDGKRLVLDEMDFFAQKKKKKKKNVVPDDEMVHQMELHVDTRLDLLTKSSPTMGEGSSEAKGNKRDDKFAAMVAELHHMNAENQRLRDQVDQANDKYHALHNQVMKIMEKRQKNEGKKADMIPRPFLDIGVAMKEESSQQHPKGKLQESKNQKICTTELEASEKVIPRVFSNSSFKDVDEASETMSMIKKARVSVRARSVSSMISDGCQWRKYGQKMAKGNPCPRAYYRCSMGTGCPVRKQVQRSAEDQSVLITTYEGQHNHVLPPAAKAMASTTSAAASMLLSGSMPSSDGLLHPSILESATLPFSQNLATLSASAPFPTITLDLTQSATNTSSQQLPQEAPQDSQLSLISPLLAPNLFNHQTKLSSLHGSQGTEPASFADTVNAATAAITTDPKFSAALMAAITSIIGSSHPVETQHCNNK* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0493 444 MobiDBLite consensus disorder prediction 66 87 - -
Pvu6g0493 444 Pfam WRKY DNA -binding domain 227 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu6g0493 444 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 19 435 IPR044810 GO:0003700
Pvu6g0493 444 ProSiteProfiles WRKY domain profile. 220 286 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu6g0493 444 Gene3D WRKY domain 210 287 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu6g0493 444 Coils Coil 97 131 - -
Pvu6g0493 444 SMART WRKY_cls 225 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu6g0493 444 SUPERFAMILY WRKY DNA-binding domain 222 286 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu6g0493 444 PANTHER WRKY TRANSCRIPTION FACTOR 6-LIKE 19 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0493 Pvu-Chr6 16091296 16095072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0493 91 430 WRKY Transcription Factor Family AT4G04450 44.020 1.01e-89 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu6g0493 WRKY 2.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0493 - - pvu:PHAVU_006G047300g 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0493 6 16091296 16095072 Pvu8g2793 8 58044223 58046591 PCT