Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0489 ATGTCGAATTTGCCCCAATCGCTGTCTATGGGTGCCGCCTTCGGTGGCGGCGGTCCACAGTCTTCGTCGAGTGGTGCCGGGTCACAGGGCTCTGGTGCCGGCAAAGATCGGAAGATGGCATCGGCGGAGCAACTGGTACTGGAACTCAGCAACCCTGAACTCCGAGAAAACGCGCTTCTGGAACTCTCCAAGAAGAGGGAGCTATTTCAAGATCTTGCTCCTTTGTTATGGAATTCTTTTGGTACTATTGCTGCACTTTTGCAGGAAATAGTATCAATTTATCCTGTTCTTTCACCACCAAATCTTACTCCTGCACAATCAAATCGAGTGTGTAATGCTCTTGCTCTTCTTCAGTGTGTAGCATCTCACCCGGATACAAGGATGCTATTCCTCAATGCTCATATACCTTTATATCTGTACCCCTTCCTTAATACAACAAGCAAGTCAAGACCATTTGAGTACTTGAGGCTTACCAGTCTTGGTGTCATTGGTGCGTTGGTGAAGGTTGATGATACAGAAGTTATAAGTTTCCTTCTTTCAACAGAAATAATTCCTCTGTGCTTGCGCACCATGGAAATGGGCAGTGAGCTATCCAAAACAGTTGCAACATTTATTGTTCAAAAAATTCTTTTGGACGATGTTGGCTTGGACTACATTTGTACTACAGCTGAGCGCTTTTTTGCGGTAGGTAGAGTTTTGGGGAACATGGTGGCAGCTCTTGCTGAGCAACCCTCCTCTCGATTACTGAAGCATATCATTAGGTGCTATCTTCGCCTGTCAGATAATCCAAGAGCTTGTGATGCATTAAGAAGCTGTCTACCAGACATGTTAAGAGATGCTACGTTCAGCAGTTGCCTTCGTGAAGACCCCACAACTAGGAGGTGGCTACAACAATTGCTTCACAATGTTGGAGTGAATCGAGTTCCTGCACTACAAGCTGGAGGAGGGTTCGATCATATGATTGTGACCTGA 972 0.4588 MSNLPQSLSMGAAFGGGGPQSSSSGAGSQGSGAGKDRKMASAEQLVLELSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDPTTRRWLQQLLHNVGVNRVPALQAGGGFDHMIVT* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0489 323 PANTHER BNAA05G20110D PROTEIN 1 321 - -
Pvu6g0489 323 Gene3D - 34 304 IPR011989 -
Pvu6g0489 323 Pfam Cell differentiation family, Rcd1-like 45 303 - -
Pvu6g0489 323 SUPERFAMILY ARM repeat 47 278 IPR016024 -
Pvu6g0489 323 PANTHER UNCHARACTERIZED 1 321 - -
Pvu6g0489 323 MobiDBLite consensus disorder prediction 1 38 - -
Pvu6g0489 323 MobiDBLite consensus disorder prediction 16 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0489 Pvu-Chr6 16037262 16045805 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Pvu6g0489 Rcd1 3.6e-130 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0489 K12606 - gmx:100784529 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0489 6 16037262 16045805 Pvu8g2787 8 57996507 58001562 PCT