Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0481 ATGAAGAAGATGTGGGTTTGGCATCATCGATTGTTTCTTCTCTGCATTCTTTGCGGCCTCTGTTTTTCTCTGCAGTTCACAAGGGGTTATGGAGATTCAAGTGCTGGAAGAATTTTGAACCAGGTGGGTGGTGATCATCAAATACATTGCTCTAGAGAAAGAAGTAGAACAGCTTGGAAGATCATTCAAGAGTATTTGATGCCCTTTGTGGAGAAAGAAAAATATCATATTCCAAGAAGGTGTAGGTTTCACCCTGACAATGACATATACAGAGATCAGGAGCAGCACAAGTTTCATACAGATATAAATGAATGGCAATGCGGTTACTGTAAGAAAAGTTTCTATGAAGAGAAACATCTCGATCAGCATTTTGATAACAGACATTCCAATTTGCTTAATTTGAATGAAAGCCAGTGCTTAGCTGATGTATGTGGTGCACTGCACTGTGACCATGAAATGAGTTCTGGTTCAAAAAAGTCAAAGTGCAATCCTTCCGCTGCTTCAAGAAATAAACATCTATGTGAGAGCTTAGCCGACAGTTGTTTTCCAATTAACGAGGGTCCTGTGACAAGCCGACTTCATGAATTGTTCTTGCACCAATTCTGTGATGCTCACAGCTGCACTGGAAGTAGGCAGCAACCTTTCTCAAGAGGGCGCCGGAAGAAGACAAATGTGTTCTACATCTTTGTGTCTATTTTGCTTGTGATACTGCTGCTACTATACTATCTCTACATTTACTTATATCAGAGAGGAATGAAAAAGGAAACTCAAGTGCTGAAGCGCATCTCACAAACCAGCAGAAAGAAAAAGCCATCCTAA 819 0.4054 MKKMWVWHHRLFLLCILCGLCFSLQFTRGYGDSSAGRILNQVGGDHQIHCSRERSRTAWKIIQEYLMPFVEKEKYHIPRRCRFHPDNDIYRDQEQHKFHTDINEWQCGYCKKSFYEEKHLDQHFDNRHSNLLNLNESQCLADVCGALHCDHEMSSGSKKSKCNPSAASRNKHLCESLADSCFPINEGPVTSRLHELFLHQFCDAHSCTGSRQQPFSRGRRKKTNVFYIFVSILLVILLLLYYLYIYLYQRGMKKETQVLKRISQTSRKKKPS* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0481 272 ProSiteProfiles Zinc finger C2H2 type domain profile. 105 130 IPR013087 -
Pvu6g0481 272 ProSitePatterns Zinc finger C2H2 type domain signature. 107 128 IPR013087 -
Pvu6g0481 272 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 3 272 - -
Pvu6g0481 272 PANTHER ZINC FINGER PROTEIN-RELATED 3 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0481 Pvu-Chr6 15960658 15965084 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0481 27 272 C2H2 Transcription Factor Family AT5G63280 58.233 5.62e-106 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pvu6g0481 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0481 - - gmx:100527694 471.47