Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0473 ATGGAGGGTATGGCAAGCAGTAATGATGTTGCCAATGGTGAAAATGGGTTGCTGGTAATGATTGGTGGTGACAATGAATTTCGTGGCGGTGAGGGTGGTGGCAATGTGGAGGAGGTGGCTCTGAAGAAGGGTCCCTGGACAACTGCAGAAGATGCTGTTCTGATAGATTATGTGACAAAACATGGTGAAGGGAATTGGAATGCAGTGCAGAAGAACACAGGGTTGAATAGGTGTGGGAAGAGTTGTAGGCTTAGGTGGGCTAACCATTTGAGGCCCAATTTGAAGAAGGGTGCATTCTCTCCTGAGGAAGAGAAGCTCATTATTGACCTTCATTCACAATTTGGCAACAAATGGGCCAGAATGGCTGCTCTGTTGCCTGGGAGAACAGACAATGAGATCAAGAACTATTGGAACACAAGGATCAAACGTCGCCAAAGACAAGGTCTCCCTCTCTATTCAGAGGAGCATGATAACCATTGTTCCACAACACCAACCCTTTCCCCATGCCTCACACAAACAGCATCAAGCCCTAATAACACTCTCACAAACTATGAGTTCTTCAACCAAAACCACCACCTCCAACACTACCAGCAACAACAACAACAAAACCACCATCAACAACACCAACCTCTATCTCCATCTGCACCTCATCATTCCCCTCTCAGTTCCCCTCTCCAACACAGACAATCATTCACCTCTTCTTCACCTCTCAATTTCTTAGACCATTCACCTCTTCCACTCTCCTCCTCTTCACCCTCCCCTCTCTCCTTCACCTTCCAGAGACCAGAACCAGTGCTATGCACCCCTCTTCGCTTCAAACGCTACCGTGCCTCTCCAAGCTACAACCCCCTCCCTGACCTTCCTCTCACCAACCAATTCCCTCATCTTGATGGATTCAGGTTCCCAGTTTCTTCAGGTTTCTCTCCGTTTTTTCAACCCTCTTTCTTAGAATCTGACCTAGGCATTTCTTCTTCCTCACCTTTCCAACCCAAGTTGGAGCTCCCTTCAAACCAGTTCTACAAACCCCCCCAAGAGCAAGACATCAAGCTTGACATTGATTTCAGTGATCCTTCTTTTCAAACTAGTAGCGGCTTGCTGGGGGATCTTCTCTTGGAGGCTCAGGCTTTGGCTTCGGGCCAGAACTCAAAGAAACGAACTTACTTGAGTTTAAATGAGGGAAATGATATGTTTGATGCATGCCAAAGCTTTGAGGACTTTCCATCTAGCTCTCTCTACTGGCCTTCTTCTGCATCAGCACCAAAAGCAAAGGAAGAGGCACCTGACTTGAGCAAATTCATGAATGAGGATTTGTCATCATTGCTAACAGTGATTCCATCTTCCAACACACAAGGTCATGAGTGGCTCAATAATGGTGTCCCAGAAGGGTCCAATGTCCAACCTTCTGGTAGTGGCATGACAGATGACAATTTTGGAGTTGATATGAAGCCAGTAGCTTCCTTGTTTCCTCTCACCAATACCACAAACCATAATGAAAACCAAGGCTGCTACACTTGGGACAATTTGCCTGGTCTCTGCTAA 1539 0.4659 MEGMASSNDVANGENGLLVMIGGDNEFRGGEGGGNVEEVALKKGPWTTAEDAVLIDYVTKHGEGNWNAVQKNTGLNRCGKSCRLRWANHLRPNLKKGAFSPEEEKLIIDLHSQFGNKWARMAALLPGRTDNEIKNYWNTRIKRRQRQGLPLYSEEHDNHCSTTPTLSPCLTQTASSPNNTLTNYEFFNQNHHLQHYQQQQQQNHHQQHQPLSPSAPHHSPLSSPLQHRQSFTSSSPLNFLDHSPLPLSSSSPSPLSFTFQRPEPVLCTPLRFKRYRASPSYNPLPDLPLTNQFPHLDGFRFPVSSGFSPFFQPSFLESDLGISSSSPFQPKLELPSNQFYKPPQEQDIKLDIDFSDPSFQTSSGLLGDLLLEAQALASGQNSKKRTYLSLNEGNDMFDACQSFEDFPSSSLYWPSSASAPKAKEEAPDLSKFMNEDLSSLLTVIPSSNTQGHEWLNNGVPEGSNVQPSGSGMTDDNFGVDMKPVASLFPLTNTTNHNENQGCYTWDNLPGLC* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0473 512 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 38 90 IPR017930 -
Pvu6g0473 512 SUPERFAMILY Homeodomain-like 41 137 IPR009057 -
Pvu6g0473 512 Gene3D - 98 165 - -
Pvu6g0473 512 ProSiteProfiles Myb-like domain profile. 91 141 IPR001005 -
Pvu6g0473 512 ProSiteProfiles Myb-like domain profile. 38 90 IPR001005 -
Pvu6g0473 512 SMART sant 42 92 IPR001005 -
Pvu6g0473 512 SMART sant 95 143 IPR001005 -
Pvu6g0473 512 MobiDBLite consensus disorder prediction 154 174 - -
Pvu6g0473 512 Pfam Myb-like DNA-binding domain 96 139 IPR001005 -
Pvu6g0473 512 Pfam Myb-like DNA-binding domain 43 90 IPR001005 -
Pvu6g0473 512 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 91 145 IPR017930 -
Pvu6g0473 512 Gene3D - 42 95 - -
Pvu6g0473 512 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 30 507 - -
Pvu6g0473 512 MobiDBLite consensus disorder prediction 194 236 - -
Pvu6g0473 512 CDD SANT 45 90 IPR001005 -
Pvu6g0473 512 MobiDBLite consensus disorder prediction 156 174 - -
Pvu6g0473 512 CDD SANT 98 139 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0473 Pvu-Chr6 15883672 15885961 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0473 17 512 MYB Transcription Factor Family AT4G26930 36.842 7.54e-67 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu6g0473 Myb_DNA-binding 1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0473 - K09422 vun:114188481 749.584