Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0471 ATGATTGTTGAAACATATGATCAAGACCGTGTGATTGTTGAAACTTATGATCAACACTGGTTACTCATGTGTATGAAGAAGGGGAAGAAAATCCGTAATTTTGTGAAGGACAGGAGTCCTAAGTACCCTCGCATTAGTGCACCACCAAGGAACAAGCTTGACCATTATCAGATCCTGAAGTACCCTCTTACCACTGAGTCTTCTATGAAGAAGATTGAGGACAACAACACTCTGGTTTTTGTATCTTTTTGTTTAGCAGAATCTAAAAAACATCATGTTTCAATTTTGACTCTTAAGTTGATGATTGAAATGAGCATGAGATAA 324 0.3704 MIVETYDQDRVIVETYDQHWLLMCMKKGKKIRNFVKDRSPKYPRISAPPRNKLDHYQILKYPLTTESSMKKIEDNNTLVFVSFCLAESKKHHVSILTLKLMIEMSMR* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0471 107 Gene3D - 23 100 IPR012677 -
Pvu6g0471 107 PANTHER 60S RIBOSOMAL PROTEIN L23A 31 94 IPR013025 GO:0003735|GO:0005840|GO:0006412
Pvu6g0471 107 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 55 81 IPR012678 GO:0003735|GO:0005840|GO:0006412
Pvu6g0471 107 PANTHER 60S RIBOSOMAL PROTEIN L23A-RELATED 31 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0471 Pvu-Chr6 15825864 15826813 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0471 38 87 Cytoplasmic Ribosomal Protein Gene Family AT3G55280 80.000 1.02e-23 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0471 K02893 - egt:105964677 103.219