Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0466 ATGTTTTCCCTCTCAAAATCCAACTTCTCTCCGGTTCGCCCCACCCTCCCTCCAGTTCGCTGCGGCATCCGCGAGCTCCGCCAACGAATCCACACCGTCCAAACCACGCAAAAGATCACCGAAGCCATGAAACTCGTTGCCGCCGCTAGGGTCCGCCGCGCTCAGGAGGCCGTTGTCAACGGCCGCCCCTTCTCCTCAAACCTCGCAGCAATGCTGAACGACATCAAACAGCACCTCCAAAACGAAGACGTTTCCACTCCTCTCACCGATGCCAGACCAGTTCAGACCGTCGCCCTCGTCGTCGTCACCGGCGACCGCGGTCTTTGCGGCGGTTTCAACAAACAGGTGTTAAAAAAGGCCGTCACCCGAATCGAGGAGCTGAAGAAACTCAATCTGGGGTGCGTTGTTATAAGCGTTGGCAAAAAGGGTCACTCGTTTTTCACTCACAACATCGAAAAGAAATACCCTTTTGTTAAAGTTGACAGCTGTATCGAAATTGGAGGTTTTCCCACCGCAAAGGAGGCTCAGGTCATTGCTGACGATGTTTTCTCATTGTTTGTTTGTGAGGAGGTGGATAAAGTTGAGCTTGTGTACACTAGGTTTGTTTCATTGATAAGGTTTGAACCTGTGGTTCAGACTTTGCTGCCTTTGGGGGAGGTTTATGATGTGAAAGATGATGTTTTTAGGTTGAGTTCTAAGGAGGGGAAGTTGGCTGTGGAGAGGGATGTTGTGAGGTTGAAGAAAGAGGGTGAGATGTTTTCCCCTCTTATGGAGTTTGAGCAGGATCCTGTTCTGATTCTTGATGCCATGTTGCCTCTTTATTTGAATAGTCAGATTTTGAGGGGGTTGCAGGAGTCTGTGGCTAGTGAGCTTGCTGCTAGGATGGGGGCCATGGCTGCTGCCACCGATAACGCTGTTGAATTGAGGAAGAGACTTTCGGTTGAATACAACCGGGAGCGGCAGGGGAAGATCACGGGGGAGTTGCTGGAGATTGTGGCTGGAGCCGAGGCTCTAACACCAATTGACTTATGA 1032 0.5087 MFSLSKSNFSPVRPTLPPVRCGIRELRQRIHTVQTTQKITEAMKLVAAARVRRAQEAVVNGRPFSSNLAAMLNDIKQHLQNEDVSTPLTDARPVQTVALVVVTGDRGLCGGFNKQVLKKAVTRIEELKKLNLGCVVISVGKKGHSFFTHNIEKKYPFVKVDSCIEIGGFPTAKEAQVIADDVFSLFVCEEVDKVELVYTRFVSLIRFEPVVQTLLPLGEVYDVKDDVFRLSSKEGKLAVERDVVRLKKEGEMFSPLMEFEQDPVLILDAMLPLYLNSQILRGLQESVASELAARMGAMAAATDNAVELRKRLSVEYNRERQGKITGELLEIVAGAEALTPIDL* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0466 343 Gene3D ATP synthase, gamma subunit, helix hairpin domain 236 338 - -
Pvu6g0466 343 PANTHER ATP SYNTHASE GAMMA CHAIN 11 339 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pvu6g0466 343 Hamap ATP synthase gamma chain [atpG]. 20 338 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pvu6g0466 343 Pfam ATP synthase 23 338 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pvu6g0466 343 Gene3D - 89 218 - -
Pvu6g0466 343 Gene3D ATP synthase, gamma subunit, helix hairpin domain 22 88 - -
Pvu6g0466 343 PRINTS ATP synthase gamma subunit signature 94 113 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pvu6g0466 343 PRINTS ATP synthase gamma subunit signature 192 209 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pvu6g0466 343 PRINTS ATP synthase gamma subunit signature 285 304 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pvu6g0466 343 PRINTS ATP synthase gamma subunit signature 316 337 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pvu6g0466 343 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 22 338 IPR035968 GO:0015986|GO:0045261|GO:0046933
Pvu6g0466 343 ProSitePatterns ATP synthase gamma subunit signature. 324 337 IPR023632 -
Pvu6g0466 343 CDD F1-ATPase_gamma 23 335 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pvu6g0466 343 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 23 338 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pvu6g0466 343 PANTHER ATP SYNTHASE GAMMA CHAIN, CHLOROPLASTIC-LIKE 11 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0466 Pvu-Chr6 15798551 15800581 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0466 3 338 Primary Pumps ATPases AT1G15700 64.286 8.20e-147 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0466 K02115 - gmx:100797879 550.436