Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0461 ATGGACTTGAAAAATTTGAAAGATTTGCTTGCAAGTGTTACAGATAGAGAGTCTCTAAATCAACTATCTTCAAAGCCATTTCAACCTTCTATGCTAGATTGGCTAATATCTAAAGATATTCCTCAGTTTTATAGTAAGAAAGAGTTACTTCAACTTGATGATTACTACGAACAACTTTCAAGCTGTTATGAATCATATGCAGAGAGAAATAATGCACCAAGAATGGTCGAAAAAAGATGTAGACAAAGTGAACAGACCTCAAAAGATGAACTTGTGGTGTCAAACATTAAAAAGGCAAAGGGAATAGTAATAAGTTCAACACCTTCACCTCTATTACCACCCTCACCCCCACTTCTATCTCTATTACCACCCCCACCCCCACCTCGACCTTTACCTTTATCTCTCTTACCACCACCACCTCTCTTACCACCACCACCCTCACCTCTATCCCTATTACCACCACCACCTCTATCTCTATTACCATCCCCACCCCCACCCCCACATCTATCTCCATCATCATTGTCGTCAAGGGTAACTATGCTAAGTCTCACACCCTCACCTCTACCATTATCGCCACCAAGGCTAATCACGACGAGTCCAACATCTCCACCACCATCAAGGCCACTCGATTTGTCAGTGGAATTCAAAAATCGAGTCATTGAATTGAATGGATATGATCTTAAATTTCTCATGCACAAGAGACTTTTCTTTTCGGATGTGAAACCAAATAGTAATCGTTTATCCATACCAGTAAAGGAAATAAAATGTGACTTTCTTACTCTAGACGAGATTACAAAGTTGGATAAAAGGGAAAATGGAAAACCCGTTGGTTTGGAAGTGACCGTGTTGGATCCCTATCTTAGAGAATATACCTTACCAATGAAGAAATGGGAAATGAAAACAAACACCTACAATCTTGTAAAAGAATGGAACAAGATTGTGTTGGCTAACAAGTTTGAAGAAGATCAAGAACTCCAAATATGGTCCTTTAGGGTTAACAACAAATTGTATTTACTTTTAAACAAACTTTGA 1032 0.3876 MDLKNLKDLLASVTDRESLNQLSSKPFQPSMLDWLISKDIPQFYSKKELLQLDDYYEQLSSCYESYAERNNAPRMVEKRCRQSEQTSKDELVVSNIKKAKGIVISSTPSPLLPPSPPLLSLLPPPPPPRPLPLSLLPPPPLLPPPPSPLSLLPPPPLSLLPSPPPPPHLSPSSLSSRVTMLSLTPSPLPLSPPRLITTSPTSPPPSRPLDLSVEFKNRVIELNGYDLKFLMHKRLFFSDVKPNSNRLSIPVKEIKCDFLTLDEITKLDKRENGKPVGLEVTVLDPYLREYTLPMKKWEMKTNTYNLVKEWNKIVLANKFEEDQELQIWSFRVNNKLYLLLNKL* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0461 343 MobiDBLite consensus disorder prediction 154 171 - -
Pvu6g0461 343 Pfam B3 domain-containing protein At2g31720-like 222 314 IPR005508 GO:0003677
Pvu6g0461 343 Gene3D - 221 342 IPR015300 -
Pvu6g0461 343 PANTHER DUF313 DOMAIN PROTEIN 6 341 - -
Pvu6g0461 343 MobiDBLite consensus disorder prediction 186 207 - -
Pvu6g0461 343 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 6 341 IPR005508 GO:0003677
Pvu6g0461 343 SUPERFAMILY DNA-binding pseudobarrel domain 231 338 IPR015300 -
Pvu6g0461 343 MobiDBLite consensus disorder prediction 154 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0461 Pvu-Chr6 15739268 15741441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0461 221 342 B3 DNA Binding Superfamily AT1G05930 24.800 2.84e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0461 - - pvu:PHAVU_006G044100g 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0461 6 15739268 15741441 Pvu8g2753 8 57761239 57761703 PCT