Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0457 TGTTTAATCAACATCTACACACTTGGGAAGGAATTGGGTAGAGGGCAATTTGGGGTGACATATCTTTGCACTGAGAATTCAACTGGGATGCAGTATGCCTGCAAGTCTATTTCTAAGAGGAAACTTGTGAGTAAATCTGATAAGGAGGATATAAAGAGGGAGATTCAGATTATGCAGCATTTGAGTGGGCAACCCAACATTGTTGAGTTCAAAGGGGCTTATGAGGACAGGCAATCAGTTCATGTTGTGATGGAGCTGTGTGCTGGTGGGGAGCTTTTTGATAGGATTATTGCCAAGGGGCATTACAGTGAGAGGGCTGCTGCTTCAATATGCAGACAAATTGTAAATGTAGTTAATATCTGCCATTTCATGGGTGTGATGCATAGGGATCTGAAGCCAGAGAATTTCTTGTTATCTAGTAGGGATGAAAATGCACTACTCAAGGCAACAGATTTTGGTTTGTCCGTTTTCATTGAAGAAGGAAAGGTATATCGGGATATAGTTGGTAGTGCTTACTATGTTGCTCCTGAAGTTCTGCGGCGCAGATGTGGGAAGGAAATAGATATATGGAGTGCAGGAGTCATACTGTATATCTTACTTAGTGGAGTCCCTCCATTTTGGGCTGAGTCTGAGAAGGGAATATTTGATGCCATATTGGAAGGTCACATTGATTTTGAAAGTCAACCATGGCCAAACATTTCAAACAGTGCCAAAGATCTTGTTCGTAAGATGCTTATACCGGATCCAAAGAAACGCATTACCTCTGCTCAAGTTCTCGACCACCCATGGATTAAAGATGGAAATGCTCCAGACAAGCCAATAGACAGTGCAGTCCTTTCCAGAATGAAGCAATTCAGAGCAATGAATAAACTAAAGAAACTTGCCCTCAAGGTCATTGCTGAGAATATGTCTGCAGAAGAGATCCAAGGTTTAAAGGCAATGTTTACAAATATGGACACTGACAAGAGTGGTACAATCACCTATGAAGAACTAAAGGCAGGATTGCATAGACTTGGCTCAAAGCTTACAGAGGCTGAAGTGAAACAGCTTATGGAAGCTGCTGATGTAGATGGAAATGGCTCAATTGACTACATAGAATTTATCACAGCTACAATGCATAGACACAAGTTAGAAAGAGATGACCAACTCTTCAAGGCCTTCCAATATTTTGATAAAGACAACAGTGGGTATATTACAAGGGATGAACTGGAATCAGCCATGAAAGAATATGGTATGGGTGACGATGCCACGATCAAGGAAATCATATCTGAAGTTGATACAATTATCTCTGAAGTGGATACAGATCATGATGGTAGAATCAACTATGAAGAATTCTCTGCAATGATGAAGAGTGGAAACCAACAATGCAAGCTATTCTAA 1380 0.408 CLINIYTLGKELGRGQFGVTYLCTENSTGMQYACKSISKRKLVSKSDKEDIKREIQIMQHLSGQPNIVEFKGAYEDRQSVHVVMELCAGGELFDRIIAKGHYSERAAASICRQIVNVVNICHFMGVMHRDLKPENFLLSSRDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRCGKEIDIWSAGVILYILLSGVPPFWAESEKGIFDAILEGHIDFESQPWPNISNSAKDLVRKMLIPDPKKRITSAQVLDHPWIKDGNAPDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENMSAEEIQGLKAMFTNMDTDKSGTITYEELKAGLHRLGSKLTEAEVKQLMEAADVDGNGSIDYIEFITATMHRHKLERDDQLFKAFQYFDKDNSGYITRDELESAMKEYGMGDDATIKEIISEVDTIISEVDTDHDGRINYEEFSAMMKSGNQQCKLF* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0457 459 Pfam Protein kinase domain 6 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0457 459 SUPERFAMILY EF-hand 287 452 IPR011992 -
Pvu6g0457 459 ProSiteProfiles EF-hand calcium-binding domain profile. 306 341 IPR002048 GO:0005509
Pvu6g0457 459 Gene3D Transferase(Phosphotransferase) domain 1 92 270 - -
Pvu6g0457 459 Gene3D - 271 455 - -
Pvu6g0457 459 CDD EFh 382 450 IPR002048 GO:0005509
Pvu6g0457 459 ProSiteProfiles EF-hand calcium-binding domain profile. 420 455 IPR002048 GO:0005509
Pvu6g0457 459 CDD STKc_CAMK 6 263 - -
Pvu6g0457 459 Pfam EF-hand domain pair 381 450 IPR002048 GO:0005509
Pvu6g0457 459 Pfam EF-hand domain pair 311 371 IPR002048 GO:0005509
Pvu6g0457 459 SUPERFAMILY Protein kinase-like (PK-like) 3 285 IPR011009 -
Pvu6g0457 459 ProSitePatterns EF-hand calcium-binding domain. 391 403 IPR018247 -
Pvu6g0457 459 ProSitePatterns EF-hand calcium-binding domain. 355 367 IPR018247 -
Pvu6g0457 459 ProSitePatterns EF-hand calcium-binding domain. 433 445 IPR018247 -
Pvu6g0457 459 ProSiteProfiles Protein kinase domain profile. 6 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0457 459 PANTHER SERINE/THREONINE-PROTEIN KINASE 4 454 - -
Pvu6g0457 459 ProSiteProfiles EF-hand calcium-binding domain profile. 342 377 IPR002048 GO:0005509
Pvu6g0457 459 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 4 454 - -
Pvu6g0457 459 ProSitePatterns Protein kinases ATP-binding region signature. 12 35 IPR017441 GO:0005524
Pvu6g0457 459 ProSitePatterns EF-hand calcium-binding domain. 319 331 IPR018247 -
Pvu6g0457 459 ProSiteProfiles EF-hand calcium-binding domain profile. 378 413 IPR002048 GO:0005509
Pvu6g0457 459 SMART serkin_6 6 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0457 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Pvu6g0457 459 Gene3D Phosphorylase Kinase; domain 1 8 91 - -
Pvu6g0457 459 CDD EFh 311 370 IPR002048 GO:0005509
Pvu6g0457 459 SMART efh_1 346 374 IPR002048 GO:0005509
Pvu6g0457 459 SMART efh_1 424 452 IPR002048 GO:0005509
Pvu6g0457 459 SMART efh_1 310 338 IPR002048 GO:0005509
Pvu6g0457 459 SMART efh_1 382 410 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0457 Pvu-Chr6 15702613 15708144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0457 5 459 EF-hand Containing Proteins AT3G20410 82.571 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pvu6g0457 Pkinase 9e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0457 K13412 - gmx:547888 877.856
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0457 6 15702613 15708144 Pvu8g2754 8 57769657 57774051 PCT