Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0443 ATGAGTGTGGTGGGGTTTGACATTGGTAATGAGAACTGTGTCATTGCTGTAGTTAGGGAACGTGGGATTGATGTTTTGTTGAATTATGAATCCAAACGCGAAACCCCAGCTGTGGTCTGCTTTAACGAGAAGCAGCGGCTTTTGGGATCTGCTGGTGCTGCTTCGGCTATGATGCATATCAAATCCACTATATCACAAATAAAGAGACTAATAGGAAGGAAATTTGCAGATCCTGATGTGGATAAAGAGCTGAAAATGCTCCCTCTTGAAACTTCGGAGAGTCCAGATGGAGGCATTTTGATTCACTTGAAGTACTTGGGGGAGATTCATGTATTTACGCCTGTTCAAATAATGTCCATGCTCTTTGCTCACTTGAAGACTATGACTGAAAAAGATTTGGAGATGCCCATTTCAGATTGTGTTATTGGGATCCCATCATACTTTACGGACTTGCAGAGACGGGCATATCTTGATGCAGCTAAAATTGCAGGGTTGAAACCTCTGAGATTGATCCATGATTGTACTGCAACTGCCCTTAGTTATGGAATGTACAAAACAGATTTTACCAGTACAGGTCCGGTTTATGTTGCATTTATTGACGTTGGTCATTGTGACACACAGGTCTCTATTGCATCATTTGAGTTTGGGAAAATGAAGATACTTTCACAGGCATCTGACAGGAGCTTAGGGGGAAGGAACTTTGATGAAGTTATTTTTAGTCATTTTGCAGCAAAATTCAAGCAAGAGTACCACATTGATGTGTATTCTAATCCCAAGGCGTGCTTTAGGCTACGTGCAGCATGTGAGAAATTGAAGAAAGTTTTGAGTGCAAATCTAGAGGCACCGCTAAATATCGAGTGCTTGATGGATGAGAAGGATGTTAAGGGCCTTATCTCAAGGGAAGAATTTGAAAAGCTCGCATCAGGATTATTAGAAAGAGTTTCTATTCCTTGCCTCAGAGCATTAACGGATGCAAACTTGACAGCGGAGAAGATTTCTTCTGTAGAGCTAGTTGGTTCGGGTTCTAGGATTCCAGCTATAAGTACAATACTAATTTCCTTATTCAAGAGAGAACCCAGTCGACAGCTGAATGCAAGTGAGTGTGTAGCTCGTGGTTGTGCTCTACAGTGTGCAATGCTCAGTCCTGTTTACCGTGTGAGAGAATACGAGGTTCAGGATGTTATTCCCTTTTCTATTGGACTTTCATCAGATGAAGGCCCAATTGCTGTGATATCAAATGGTGTACTTTTCCCAAAAGGCCAACCCTTTCCAAGTGTTAAAGTCATAGCCTTTCAGCGAAGTAATTTGTTTCATTTGGAAGCGTTCTATGTTAATCCAGATGAACTACCACCTGGGACATCTCCTAAAATTAGTTGTGTCACGATTGGCCCTTTCCATGGATCCCATGGTAGTAAGAGCAGAGTTAAAGTTAGAGTTTCACTTGATCTGCATGGAATTCTCAATATTGAATCAGCTACATTGATCAAGAATGACATGGATGATTTGGTTATGGCGGGTGATCATAATTCAAATTCTGATGAAATGGATATTGATCCCATTCCTGAGACAGTTACCAATGGGTTTGAAGATATTACCAATAAGAAGTTGGAATCTCCATACAGTTCTGTCGATGGTATAAGAAAAGATAAGGGTACCAGACGGGTTGATGTGCCAGTGAATGAGAATATCTATGGTGGAATGACAAAGGCAGAAATTTCAGAAGCTCGTGAAAAAGAACTCCAGTTGGCCCAACAGGACATAATTATAGAGCAAACCAAAGAAAAGAAGAATAGTTTGGAGTCTTATGTCTATGATATGAGGAGTAAGCTCTTCCACACATATCGAAGCTTTGCGAGTGAACACGAGAGGGATGACATATCTAGGAGTCTTCAAGAGACTGAGGAATGGCTTTATGAGGATGGTGTTGATGAAACTGAGAATGCTTATTCTTCAAAACTGGAAGATCTGAAAAAGCTGGTAGATCCAATTGAGAATCGTTTCAAAGATGAAAAAGAAAGAGTGCAAGCTAAAGAGGATTTATCGAAGTGCATTTTAAAGCATCGGACATCTGCAGAATCCCTTCCACCCCAGGATAAAGAACTGATCATCAACGAGTGCAATAAAGCAGAGCAGTGGTTGAAAGAGAAGATCCAGCAACAAGAATCCTTTCCTAAGAATACTGACCCAATATTATGGTCAAGTGATATTAAGAGCAAGACAGAAGAGTTTAACCTAACATGCCAACACATATTGGGATCCAAGACTTCTCCATCTCCAGAAGATAAAGACATGCCAGATTCGTTCAATGATCCATGA 2316 0.4072 MSVVGFDIGNENCVIAVVRERGIDVLLNYESKRETPAVVCFNEKQRLLGSAGAASAMMHIKSTISQIKRLIGRKFADPDVDKELKMLPLETSESPDGGILIHLKYLGEIHVFTPVQIMSMLFAHLKTMTEKDLEMPISDCVIGIPSYFTDLQRRAYLDAAKIAGLKPLRLIHDCTATALSYGMYKTDFTSTGPVYVAFIDVGHCDTQVSIASFEFGKMKILSQASDRSLGGRNFDEVIFSHFAAKFKQEYHIDVYSNPKACFRLRAACEKLKKVLSANLEAPLNIECLMDEKDVKGLISREEFEKLASGLLERVSIPCLRALTDANLTAEKISSVELVGSGSRIPAISTILISLFKREPSRQLNASECVARGCALQCAMLSPVYRVREYEVQDVIPFSIGLSSDEGPIAVISNGVLFPKGQPFPSVKVIAFQRSNLFHLEAFYVNPDELPPGTSPKISCVTIGPFHGSHGSKSRVKVRVSLDLHGILNIESATLIKNDMDDLVMAGDHNSNSDEMDIDPIPETVTNGFEDITNKKLESPYSSVDGIRKDKGTRRVDVPVNENIYGGMTKAEISEAREKELQLAQQDIIIEQTKEKKNSLESYVYDMRSKLFHTYRSFASEHERDDISRSLQETEEWLYEDGVDETENAYSSKLEDLKKLVDPIENRFKDEKERVQAKEDLSKCILKHRTSAESLPPQDKELIINECNKAEQWLKEKIQQQESFPKNTDPILWSSDIKSKTEEFNLTCQHILGSKTSPSPEDKDMPDSFNDP* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0443 771 Pfam Hsp70 protein 3 666 IPR013126 GO:0005524|GO:0140662
Pvu6g0443 771 PANTHER HSC70CB, ISOFORM G-RELATED 1 762 - -
Pvu6g0443 771 CDD HSPA4_like_NDB 2 381 - -
Pvu6g0443 771 SUPERFAMILY Actin-like ATPase domain 192 381 IPR043129 -
Pvu6g0443 771 Gene3D - 186 360 - -
Pvu6g0443 771 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 762 - -
Pvu6g0443 771 Gene3D - 38 113 - -
Pvu6g0443 771 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 385 518 IPR029047 -
Pvu6g0443 771 MobiDBLite consensus disorder prediction 750 771 - -
Pvu6g0443 771 Gene3D - 567 679 IPR029048 -
Pvu6g0443 771 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 600 IPR029047 -
Pvu6g0443 771 Gene3D - 5 374 - -
Pvu6g0443 771 Gene3D Actin; Chain A, domain 4 230 313 - -
Pvu6g0443 771 PRINTS 70kDa heat shock protein signature 2 15 - -
Pvu6g0443 771 PRINTS 70kDa heat shock protein signature 30 42 - -
Pvu6g0443 771 PRINTS 70kDa heat shock protein signature 140 160 - -
Pvu6g0443 771 PRINTS 70kDa heat shock protein signature 332 348 - -
Pvu6g0443 771 PRINTS 70kDa heat shock protein signature 363 383 - -
Pvu6g0443 771 PRINTS 70kDa heat shock protein signature 388 407 - -
Pvu6g0443 771 PRINTS 70kDa heat shock protein signature 472 488 - -
Pvu6g0443 771 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Pvu6g0443 771 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 569 666 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0443 Pvu-Chr6 15533547 15539250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0443 2 663 Miscellaneous Gene Families AT5G28540 28.102 1.24e-75 256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0443 6 15533547 15539250 Pvu6g0443 6 15533547 15539250 ECH
Pvu6g0443 6 15533547 15539250 Pvu8g2762 8 57824220 57829405 PCT