Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0414 ATGAAATCGAATTTTGGAAAAAAGAAAATGAGTTTATTTCCTTGTTGTACAACACAAAAGAGGCCCAGCAAGATCAAATGGAAGAAGAGCATTAAGGAAGATAATGATAATAAAAGTGTGGTCTCATTTTCCAACATCTCTTTTAAATCGGATAGTGGGAAGAGAAAGTTCATAACCGATGAGATAGCAAAGCTTGGGAAAGGAAATATCACCTCTAGGATAATTTCTTATCATGAGCTATGTGTTGCAACTCAGAACTTTCACCCTACCAACATGATTGGTGAAGGAGGCTTTGGAAGGGTATACAAAGGATACCTTAAAAGCACTAATGAGGTGGTTGCTGTGAAGCAACTAGACAGAAATGGATTTCAAGGAAACAGGGAATTTCTTGTAGAGGTTTTAATTTTGAGTCTTTTAGACCACCCTAATCTTGTCAACTTGATAGGGTATTGTGCCGAAGGTGAACATAGACTTTTGGTATATGAATACATGGTTAATGGATCTTTAGAAGATCATTTACTTGACTTAACTGAAGAAGCGAAGCCCTTGGACTGGCAGGCCAGAATGAAAATTGCTAAAGGCGCAGCAAAAGGACTTGAATATTTGCATGATCAAGCAGACCCTCCAGTGATATATCGTGATTTCAAAGCATCAAATATATTGTTAGATGAAAACTTCAATCCAAAACTCTCTGATTTTGGACTTGCAAAGCTTGGTCCAACAGGAGACAAAACACATGTGTCTACTAGAGTGATGGGAACATATGGATATTGTGCTCCTGAGTATGCATTAACAGGACAATTGACTACAAAATCAGATGTGTATAGTTTTGGAGTGGTGTTTTTGGAGATGATCACAGGACGAAGAGTAATTGAATATTCAAGACCAGAAGATGAACAAAATTTAGTTGTTTGGGCACAACCACTTCTAAAAGATAGGAAGAAGTTTATACAAATGGCAGATCCATTGCTAAAAGACAAGTACCCTATAAAGAGTTTATACCAAGCTCTAGCAGTTGCAGCAATGTGTCTCCAAGAAGAAGATGAAACTCGACCTATAATCAGTGATGTAGTTACAGCCATTGAATTTTTAGCAAGGAAGAGAGTAGAAGTTGATGAACCACAACCCAGAAAAGAAATTTCTCCTACTCAGGAAGAAGATAGTAATCACAACTAA 1176 0.3724 MKSNFGKKKMSLFPCCTTQKRPSKIKWKKSIKEDNDNKSVVSFSNISFKSDSGKRKFITDEIAKLGKGNITSRIISYHELCVATQNFHPTNMIGEGGFGRVYKGYLKSTNEVVAVKQLDRNGFQGNREFLVEVLILSLLDHPNLVNLIGYCAEGEHRLLVYEYMVNGSLEDHLLDLTEEAKPLDWQARMKIAKGAAKGLEYLHDQADPPVIYRDFKASNILLDENFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYALTGQLTTKSDVYSFGVVFLEMITGRRVIEYSRPEDEQNLVVWAQPLLKDRKKFIQMADPLLKDKYPIKSLYQALAVAAMCLQEEDETRPIISDVVTAIEFLARKRVEVDEPQPRKEISPTQEEDSNHN* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0414 391 PANTHER OS07G0668900 PROTEIN 10 379 - -
Pvu6g0414 391 ProSitePatterns Protein kinases ATP-binding region signature. 93 116 IPR017441 GO:0005524
Pvu6g0414 391 Gene3D Phosphorylase Kinase; domain 1 48 163 - -
Pvu6g0414 391 CDD STKc_IRAK 93 362 - -
Pvu6g0414 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Pvu6g0414 391 ProSiteProfiles Protein kinase domain profile. 87 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0414 391 MobiDBLite consensus disorder prediction 372 391 - -
Pvu6g0414 391 Pfam Protein kinase domain 89 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0414 391 Gene3D Transferase(Phosphotransferase) domain 1 164 384 - -
Pvu6g0414 391 PANTHER RECEPTOR SERINE/THREONINE KINASE 10 379 - -
Pvu6g0414 391 SUPERFAMILY Protein kinase-like (PK-like) 71 363 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0414 Pvu-Chr6 14941940 14945392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0414 69 381 Glycoside Hydrolase AT3G07070 67.500 1.60e-156 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pvu6g0414 Pkinase 7.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0414 - - gmx:100790474 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0414 6 14941940 14945392 Pvu8g2746 8 57704635 57707947 PCT