Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0389 ATGGTAACCATTGTTGCTTCTTACCGTGTTCTTCCTTGTGAAGAAACTCCCAAAGGTCATTTATGGTTAGCAGATAGTGACCAAGTTGTGCGTTCAGGTCACACACCCACCTTCTATGTATACCAAGCAAAACACAACCATGACACCAATGAGAGGTTGAGGAAGTCACTTGGTGAGATTTTAGTGCACTACTATCCAGTTGCTGGAAGGTTGAGCTTAGCAGAAGATGCTCGAATTCAGCTGGATTGCAATGCCAAGGGAGTCACATTTATTGAAGCTGAAACCACAAAATCAATGGCTGATTATGGAGACTTTTCACCTGGTGTTGTCGCTGAGCTTGTTCCAAAGATTGATTACACTCAACCCGTGGAGGAGATTCCTTTGATGCTTGTGCAATCCACAAGACTCCCTGGTGGTAATGGCTTTGTCATTGGACTTGCTGTGTGTCACGTTTTGTCTGATGGGCTAGGTAGCATTCAATTCATCAATTCATGGGCAAAACTGGGTCGTGGAGAGACACTGGAGCCACATGAATTGCCATATCTTGATAGAACAGTACTCAAACACCAACACTCGTCAACATCACCATCACCATGCTTTGATCACCCCGAGTTGAAGCCTCTACCGCTTAAACTAGGAAGCTCTGACATCAATGCTGAGCAGAAGAAGAAGACAAGAGCTGTGTTACTGAAACTAACGCGACAACAAGTGGAGAAGCTGAAGAAGGAGGCCAATGAACAACCCTTGCAAGAAGGGGTTAGAGCTTATAGCAGATTTGAAGCTCTTGCTGGTCATATATGGAGATCTGCATCCAAGGCTCGTGAACTTGAAGAGAAGCAACCAACCGTAGTTCGTTTCAATGCTGATATCCGCAGCAGAGTAATTCCTCCTCTTCCTAAGAACTACTATGGGAATGCTTTGGCAGCAACAGTGACACCCAAATGCTATGTTGGAGAGATTGTGTCAAAGCCTTTGAGCTATGCTGCACAAAAAGTAAGAGAAGCGATTGAAAAGCTTACTAATGAGTACATAAGGTCACAGCTGAAGAATGTGTTGGGTGAGGAGCAGTTAGATTGCATAAGGCGTTTGTTCATGGGAGAAGGAGAGCGTAGGAATGTCCCTTTTGCAGGGAACCCAAATCTTCATATCACAAGCTGGATGAGCATGCCATTGTATGAAGCAGATTTTGGATGGGGAAAGCCTGTGAATTTTGGGTTGGCATATGTGTTTGCACAAGATAGAGCAGTGATTATTCTAAGTCCACATGGTGATGGATCCATTGTTATTTCCATGACCTTCCAAGAAGAACATTTGGAACTTTTCAAGAAATTCTTCTATGAGACCATATGA 1350 0.4385 MVTIVASYRVLPCEETPKGHLWLADSDQVVRSGHTPTFYVYQAKHNHDTNERLRKSLGEILVHYYPVAGRLSLAEDARIQLDCNAKGVTFIEAETTKSMADYGDFSPGVVAELVPKIDYTQPVEEIPLMLVQSTRLPGGNGFVIGLAVCHVLSDGLGSIQFINSWAKLGRGETLEPHELPYLDRTVLKHQHSSTSPSPCFDHPELKPLPLKLGSSDINAEQKKKTRAVLLKLTRQQVEKLKKEANEQPLQEGVRAYSRFEALAGHIWRSASKARELEEKQPTVVRFNADIRSRVIPPLPKNYYGNALAATVTPKCYVGEIVSKPLSYAAQKVREAIEKLTNEYIRSQLKNVLGEEQLDCIRRLFMGEGERRNVPFAGNPNLHITSWMSMPLYEADFGWGKPVNFGLAYVFAQDRAVIILSPHGDGSIVISMTFQEEHLELFKKFFYETI* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0389 449 Gene3D - 1 207 IPR023213 -
Pvu6g0389 449 Coils Coil 329 349 - -
Pvu6g0389 449 Pfam Transferase family 1 447 - -
Pvu6g0389 449 Gene3D - 214 448 IPR023213 -
Pvu6g0389 449 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 448 - -
Pvu6g0389 449 Coils Coil 227 247 - -
Pvu6g0389 449 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 3 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0389 Pvu-Chr6 14643973 14645556 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0389 2 447 Monolignol Biosynthesis Gene Families AT5G48930 34.967 6.07e-94 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0389 K13065 - gmx:100779814 681.404