Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0387 ATGCCTTCAACCAACAAAATGGTAACCATTGTGGCTTCTCACAATATCACACCAAATCAACCAACTCCCAATGATCCCTTATGGCTATCAGATAGTGACCAAATCGGAAACCTACGCCATGTTTCCTGTGTTTATATTTACAAAGCAAAACACAACAAGCACGTCACAGAGAGGCTGAGGAACTCTCTTAGCAAGACTTTAGTGCACTACTATCCAGTTGCTGGCAGATTGAGATTGACAAAAAGTGGTCGAATGGAAGTGAACTGCAACGCTAAGGGAGTCACGTTGCTCGATGCTCATACCACAAACTCATTTGCTGATTATGGAGACTTTTCACCTTCTCTATCCACAGAGCAACTTGTTCCAAAAGTTGATTACACTCAACCTATAGAGGACATTCCTTTAATGCTGATGCAGATAACAGGGTTTCATGGTGGTGAAGGCCTTGCCATTGGAATTGTTACCTCTCATCCTTTGACCGATGCAACCAGCATGATGCCCTTTGTGAACAATTGGGCAAAGGTGGCTCGAGGAGAAGAACTAGACCCTAATGAAATTCCATTTCTTGATCGAGTAGTGCTCAAACTACCACAACAACCTTCATCACCAAGTGTTAAACTCCCAGAATGGAAGCCTGTGTCGCAAGCACAAGGAATAGAGCAAGGGCAGAGAAGTGCTGCGTTGTTCAAACTCTCTTCAAGACAGGTGGAGATACTAAAGAAGAAGGCTAATAATGATAAAGCTTCAAATGAAGGGGTAAGACCTTATAGCAGATTTGAAGTTATTGCTGCTCATATATGGAGATGCGCATCTAAGGCTCGTGCATCTGCTGAGAATTCAAACCAACCAACCCTAGTTCGGTTTAGTGTTGATATTCGCAGTAGATTGAATCCACCTCTTCCTAAGAATTATTTTGGGAATGCTTTGGCGAAAACAGTGACACCTAAATGTTATGAGGGAGATATCATATCAAACCCTTTACGTTATGCTGCTCAGAAGATAAGAGAAGCAGTTTATGTGGTTACAGATGAGTATATAAGAGCACAATTAAGTGTTATTTTAGGGCAAGAGCAATTGGACAGCATAAGTGCTTTTTTTATGGGTCAAGGACATCGTGTGAATGTGCCCTATGCTGGGAATCATAACATTCTCCTCACAAGCTGGATGGGCATGCCAGTGTATGAAGCAGATTTTGGTTGGGGAAAACCTGTGCATTATGGGTTAGCAACTACCTTTGAAGAAGATAGAGCAGCAATTCTTCCAAGCTCAGATGGAGATGGTGTTGCTGTCACCATATTTTTCCAAACAGCACTTATGGAGCTTTTCAAAATATTATTCTATGAGGATTTGTTTTTATCTTCATTATAA 1368 0.4145 MPSTNKMVTIVASHNITPNQPTPNDPLWLSDSDQIGNLRHVSCVYIYKAKHNKHVTERLRNSLSKTLVHYYPVAGRLRLTKSGRMEVNCNAKGVTLLDAHTTNSFADYGDFSPSLSTEQLVPKVDYTQPIEDIPLMLMQITGFHGGEGLAIGIVTSHPLTDATSMMPFVNNWAKVARGEELDPNEIPFLDRVVLKLPQQPSSPSVKLPEWKPVSQAQGIEQGQRSAALFKLSSRQVEILKKKANNDKASNEGVRPYSRFEVIAAHIWRCASKARASAENSNQPTLVRFSVDIRSRLNPPLPKNYFGNALAKTVTPKCYEGDIISNPLRYAAQKIREAVYVVTDEYIRAQLSVILGQEQLDSISAFFMGQGHRVNVPYAGNHNILLTSWMGMPVYEADFGWGKPVHYGLATTFEEDRAAILPSSDGDGVAVTIFFQTALMELFKILFYEDLFLSSL* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0387 455 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 9 450 - -
Pvu6g0387 455 Gene3D - 218 449 IPR023213 -
Pvu6g0387 455 Pfam Transferase family 7 444 - -
Pvu6g0387 455 Gene3D - 7 212 IPR023213 -
Pvu6g0387 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0387 Pvu-Chr6 14513424 14514949 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0387 8 448 Monolignol Biosynthesis Gene Families AT5G48930 35.022 7.75e-81 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0387 K13065 - gmx:100802888 640.958