Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0385 ATGGTAAGCATTGTAGGTTCTTACAATGTCACCCCAAATCAACCAACTCCCACTGAACCTTTATGGCTATCAGATAGTGACCAAATCGGGTTCCTAGGTCACGTGCCCAATATCTTCATCTACAAAGCAAAACACACTGAAAACCCCATCCAGAGGATGAGGAACTCTCTTAGCAAGACTTTAGTTCACTACTATCCAGTAGCTGGAAGATTGAGATTGACAAAAGCTGATCGAATGGAAGTGGATTGCAACGCAAAGGGAGTCACGTTGATCGAAGCCCAAAGCACAAAATCATTTGCTGATTATGGAGACTTTTCACCCTCTGATTCAACGGAAGAACTTGTTCCAAAAGTTGACTACACTCAACATATAGAGGAGATTCCGCTGCTACTACTTCAGGTAACAAGGTTCCATGGTGGTGAAGGGCTTGCCCTTGGAGTTGTTATCTCTCACCCTTTGACGGATGCCTCCGGCATCATCCGCTTAGTGAACAATTGGGCAAAGGTGGCTCGGGGAGAAGAACTGCTGCCTAATGAAATTCCATTTCTAGATCGAAGAGGGCTCATATTACTACCCCAACACTCATCACCAGATGTTAAACTCCCAGAGTGGAAGCCTGTGCCACGAACACCACAAATGGAGCAAAAGAAGAGAAGTGCTTTGTTGTTGAAACTCACATCAAGCCAGGTGGAGATGCTAAAGAAGAAGGCTAATGAAAAAGCTTCAAAAGAAGGAGTAAGACCCTATACCAGCTTTGAAGTTGTTGCTGCTCATATATGGAGATGTGCAGCCAAGGCCCGTGAATCTGGTGAGAACCACCCTACTTTTGTTCGGTTTAGTGTGGATTTTCGTAGTAGATTGAATCCACCTCTCCCTCAGAACTACTTTGGGAATGCTTTGGCCAAAGGAGTGACACCAAAATGTTATGAGGGAGATATCATATCAAACCCTTTAGGTTTTTCTGCTGAAAAGATAAGGGAAGCAGCTCATGCAGTTACAGATGAGTTTATAAGGTCACAGTTAAAGGGTAGTTTAGGGCAAGGGCAACAGGATCACATAAGGGCTTTTTTCAAGGGACAAGGGCACCTTATGAATGTCCCTTATGCTGGGAATCATAACATTCTGCTCACTAGCTTGACGACGATGCCAGTGTATGAAGCAGATTTTGGTTGGGGAAAGCCTATGCATTATGGTATAGCACAAGTCTTTCAAGAAGATAGAGCACTGATTGTTCGAAGCCCACATGGAGACGGTGTTCTTGTCACCATATTCTTCCAGACAGCACTTATGCAGCCTTTTCAAAAATTCTTCTACGAGGATCTGTTTGTGTCCTCGTTATAA 1341 0.44 MVSIVGSYNVTPNQPTPTEPLWLSDSDQIGFLGHVPNIFIYKAKHTENPIQRMRNSLSKTLVHYYPVAGRLRLTKADRMEVDCNAKGVTLIEAQSTKSFADYGDFSPSDSTEELVPKVDYTQHIEEIPLLLLQVTRFHGGEGLALGVVISHPLTDASGIIRLVNNWAKVARGEELLPNEIPFLDRRGLILLPQHSSPDVKLPEWKPVPRTPQMEQKKRSALLLKLTSSQVEMLKKKANEKASKEGVRPYTSFEVVAAHIWRCAAKARESGENHPTFVRFSVDFRSRLNPPLPQNYFGNALAKGVTPKCYEGDIISNPLGFSAEKIREAAHAVTDEFIRSQLKGSLGQGQQDHIRAFFKGQGHLMNVPYAGNHNILLTSLTTMPVYEADFGWGKPMHYGIAQVFQEDRALIVRSPHGDGVLVTIFFQTALMQPFQKFFYEDLFVSSL* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0385 446 Gene3D - 1 206 IPR023213 -
Pvu6g0385 446 Gene3D - 209 440 IPR023213 -
Pvu6g0385 446 Pfam Transferase family 1 438 - -
Pvu6g0385 446 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 441 - -
Pvu6g0385 446 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0385 Pvu-Chr6 14490762 14492102 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0385 2 439 Monolignol Biosynthesis Gene Families AT5G48930 33.929 4.56e-75 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0385 K13065 - gmx:100802888 634.024