Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0354 ATGGACTTTTTCTCTGAATATGGTGATGCCAACCAGTACAAGATTCAAGAAGTCATTGGAAAGGGTAGCTATGGTGTTGTCTGTTCAGCCATTGACACTCTCAGTGGAGAAAAAGTGGCAATTAAGAAGATTCATGATATCTTCGAGCATACATCTGATGCTGCTCGAATTCTCCGTGAGATAAAGCTGCTCAGACTTCTTCGACATCCTGATATTGTAGAAATAAAACACATTATCCTGCCTCCATCATGGAAGGACTTTAAAGATATTTATGTTGTTTTTGAGCTCATGGAGTCTGATCTTCATCAAGTCATTAAAGCCAATGATGACTTGACAAAAGAACACTATCAATTTTTTCTTTATCAATTACTTCGAGCACTCAAGTTCATTCATACTGCAAATGTCTTTCATCGAGATTTGAAGCCAAAGAATATATTGGCAAATGCAAACTGTAAGCTTAAAATCTGTGATTTTGGGTTAGCTAGAGTTGCCTTCAGTGACACACCAACAACTATATTTTGGACGGATTATGTTGCTACAAGGTGGTATAGAGCTCCAGAGCTATGTGGATCATTTTACTCAAAGTATACACCAGCAATTGATATATGGAGTATAGGTTGTATCTTTGCTGAAGTACTAACGGGAAAGCCACTTTTTCCTGGGAAAAATGTAGTACACCAATTGGACCTGATGACAGATCTGCTTGGGACACCTTCACTGGATACTATATCACGGGTCCGCAATGAGAAAGCAAGGAGATACCTAACTAGCATGAGGAAAAAACAGCCTGTGTCATTTGCTCAAAAGTTTTCCAATGCTGACCCTTTAGCACTGAGACTACTGGAAAAGTTGTTGGCCTTTGATCCAAAAGACCGGCCTACCGCCGAAGAGGCGTTGGCTGATCCTTACTTCAAGGGGCTGGCAAAAGTTGAGAAGGAGCCATCTTGCCAGCCTATCACAAAAATGGAATTTGAATTTGAAAGACGAAGAGTCACAAAGGATGAAATTCGAGAACTGATTTTCCATGAGATTCTAGAGTATCATCCTCAACTATTGAAAGACTACATGAATGGAACTGAGAGAACTAACTTTCTTTATCCAAGTGCCGTTGATCAATTCAGAAAGCAGTTTGCTCATCTGGAGGAAAATGGTATTAATGGTCATGTTTTGCCACTTGAAAGAAAGCACGTTTCTCTTCCAAGGTCAACCATTGTACATTCAAATACAATACACCCAAAAGATCAAACAAACATTGCTGCCAGCAAAAACCGACCAACTGCTGAGGAATGCAACAGGAATTCCAGAGATGCAAAAATTCTAGTGCCAAGGTCAATGCAGGGACCACAAAGAATTCCACTAGCAAAACCTGGTAAAGTTGTGGGGCCAGTTGTTCCATACGACTTCGATGACATTGTCAAGGATTCTTATAATCCTAGGTCGTTTATCAGAGGTTCTGTGCTTCCTACTCAACCTGTTCCCCCAGCTTACTATTATCATCAGAGATCTAGCAGTGGAAACCAAGAAAGGGCAGCAACAGAAGCTGGCAAGAGTGTGCCTTCGCAAGCAACACATCCACAAGAACAAGTTGGAGTTAATCCCAAGATGGCACCTGAGATAGCTATTAATATTGATACAAATCCCTTTTTTATGACAAGGGCAGGAGTTAACAAGTTAGAGCAAGGTGATCAAATAGTCATAGATACAAACTTGTTGCAGCCAAAGACATATGGTGGAAACAGTGCTGCAGCTGGTGCCCCTGCTCATAGAAAGGTAGGTCCTGTTCAGTATGGTATGACAAGAATGTTCTAG 1809 0.4085 MDFFSEYGDANQYKIQEVIGKGSYGVVCSAIDTLSGEKVAIKKIHDIFEHTSDAARILREIKLLRLLRHPDIVEIKHIILPPSWKDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKFIHTANVFHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNEKARRYLTSMRKKQPVSFAQKFSNADPLALRLLEKLLAFDPKDRPTAEEALADPYFKGLAKVEKEPSCQPITKMEFEFERRRVTKDEIRELIFHEILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAHLEENGINGHVLPLERKHVSLPRSTIVHSNTIHPKDQTNIAASKNRPTAEECNRNSRDAKILVPRSMQGPQRIPLAKPGKVVGPVVPYDFDDIVKDSYNPRSFIRGSVLPTQPVPPAYYYHQRSSSGNQERAATEAGKSVPSQATHPQEQVGVNPKMAPEIAINIDTNPFFMTRAGVNKLEQGDQIVIDTNLLQPKTYGGNSAAAGAPAHRKVGPVQYGMTRMF* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0354 602 ProSitePatterns MAP kinase signature. 48 151 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pvu6g0354 602 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 2 477 - -
Pvu6g0354 602 MobiDBLite consensus disorder prediction 497 528 - -
Pvu6g0354 602 CDD STKc_TDY_MAPK 12 349 - -
Pvu6g0354 602 Gene3D Phosphorylase Kinase; domain 1 28 350 - -
Pvu6g0354 602 ProSiteProfiles Protein kinase domain profile. 13 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0354 602 SUPERFAMILY Protein kinase-like (PK-like) 10 308 IPR011009 -
Pvu6g0354 602 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 2 477 - -
Pvu6g0354 602 ProSitePatterns Protein kinases ATP-binding region signature. 19 43 IPR017441 GO:0005524
Pvu6g0354 602 Gene3D Transferase(Phosphotransferase) domain 1 99 327 - -
Pvu6g0354 602 MobiDBLite consensus disorder prediction 497 529 - -
Pvu6g0354 602 Pfam Protein kinase domain 13 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0354 602 SMART serkin_6 13 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0354 Pvu-Chr6 13767639 13774715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0354 1 423 MAP Kinase Gene Family AT2G42880 86.321 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pvu6g0354 Pkinase 2.4e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0354 - - gmx:100811788 1073.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0354 6 13767639 13774715 Pvu8g1985 8 49722993 49729169 PCT