Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0351 ATGTATGGTGGTTGCATGTTGACCCCTTTCCAGAAGCAAAAGAAGAAAAAAGATCATGAAACCTTGATCATCGTGATATCAGTTCTTTTGAGCTTCTTAGTGTTGGTCATTTTAGTGTTGGTTGGTGCAATGTATTTTGGTTTCTCCTTCAACCGCAAGAAGATCAAAAGTAGTAAAACCAACAACGGTGTCATTGAGAAAAACTTGCGTAACTTCACCTTCAAGGAACTTGTAGAAGCAACGGGTAACTTTAGTGAAGAATTGGGAAGGAGGTCTTTTAGCATTGTCTACAAAGGAACAATAGACATGACTAGTTTGGCTGTTAAGAAATTAGACAAGTTGTTTCGAGACAATGACAGGGAATTTCAGACTGAAATGAATGTAATAGGTCAAACTCATCATAGGAATCTGGTTCGTCTACTTGGATACTGCAATGAAGGACAACACAGAATTTTGGTGTATGAGTTTATGAGCAATGGCACTTTAGCAAGCTTCCTTTTCACCCCTTTGAAAGCAAATTGGAGACAACGATTTGAAATTGCCTCTGGGATTGCAAGAGGTCTTGTTTACTTGCATGAGGAATGTTGCACCCAAATCATCCACTGTGACATAAAGCCACAAAATATACTTCTAGATGATCAATATAATGCCAGAATTTCAGATTTTGGATTAGCAAAGCTATTACTGATCAATCAAAGCCACACTGAAACTGGAATTAGAGAAACAAAAGGGTATGTTGCACCAGATTGGTTTAGAAGTTCACCAATCACTACTAAGGTTGACACCTATAGTTTTGGTGTGTTGTTATTAGAGATAATTTGTTGTAGGAGGAATACTAGAAGACTAGACATTCTTCTAGAAAATGATGATGAAGCTGTTAAGAACATTAAGAGTTTTGAAAAATTTGTGATGATTGCTCTTTGGTGCATTCATGAAGATCCCACTCTTCGACCAACAATGAAGAAGGTTTTGCTAATGCTGGAAGGAATTGTTGAAGTTTTAATACCCCCAAATCCCTACCTTTATGGTTCTGCAAGTTAA 1041 0.3727 MYGGCMLTPFQKQKKKKDHETLIIVISVLLSFLVLVILVLVGAMYFGFSFNRKKIKSSKTNNGVIEKNLRNFTFKELVEATGNFSEELGRRSFSIVYKGTIDMTSLAVKKLDKLFRDNDREFQTEMNVIGQTHHRNLVRLLGYCNEGQHRILVYEFMSNGTLASFLFTPLKANWRQRFEIASGIARGLVYLHEECCTQIIHCDIKPQNILLDDQYNARISDFGLAKLLLINQSHTETGIRETKGYVAPDWFRSSPITTKVDTYSFGVLLLEIICCRRNTRRLDILLENDDEAVKNIKSFEKFVMIALWCIHEDPTLRPTMKKVLLMLEGIVEVLIPPNPYLYGSAS* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0351 346 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 9 345 - -
Pvu6g0351 346 Pfam Protein kinase domain 85 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0351 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Pvu6g0351 346 Gene3D Transferase(Phosphotransferase) domain 1 157 334 - -
Pvu6g0351 346 Gene3D Phosphorylase Kinase; domain 1 45 156 - -
Pvu6g0351 346 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 9 345 - -
Pvu6g0351 346 ProSiteProfiles Protein kinase domain profile. 82 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0351 346 SMART serkin_6 82 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0351 346 SUPERFAMILY Protein kinase-like (PK-like) 64 328 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0351 Pvu-Chr6 13664824 13665920 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0351 23 343 Receptor kinase-like Gene Family AT4G23220 38.109 6.42e-67 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pvu6g0351 Pkinase 8.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0351 - - pvu:PHAVU_006G033300g 677.552