Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0349 ATGGTGTCCTCCATGGAGTTCCTAAGGCTTGCAAATTGGCTCATGAACCAGGTTCTTGTTAAATCATGTTATGGAATAGCAAGGAAAATTAAAAACCATGGTTTTCAATGGGGTGATCTTTCATCTAAACCATTGCAACAACCTTCCTCATTCCCTAATATCATCAAGTGTGATTTGGAGGATAGAGGGTCTCAAACCCTTGTTTGTGACTTCCACAAAGTCCTCTTAAGGACTCATTCTTTCTTTCCTTATTTCATGCTGGTTGCCTTTGAAGGTGGAAGCATTTTCAGGGCATTTCTCTTGCTTTGTTCATGTCCTATACTGTGGATTCTGAACTATGAAATGAAGCTCAGAGTCATGATCTTCATCTCCTTTTGTGGACTCAAAGTGAAGGACATGGAGAACACTTCAAGGGCAGTTTTACCAAAGTTTTACTTGGAGAACCTTAATCTTGAGGCCTATGAGGTGGTGGCTTCAGTAGGGTCCAGGGTTATCTTCACCACTATGCCTAGAGTGATGGTGGAAGGGTTTCTGAAGGAGTATTTGAATGCTGATGCTGTTATAGCCACAGAGTTGCACACTGCTGGTTGTTACTTCACTGGTTTACTCTCCAAGTCTGGTTTGCTTGTGAAGCACAGTGCCCTCATGGATTATTTTGGAGATACAAAACCTGACCTTGGCATTGGTAACACAAGTCTTCATGATCAGCTTTTTATTTCTCTTTGCAAGGAGGCTTATGTGGTGATGAATGAGGGAAAAGTGATACCAAGGAACAAATATCCAAAGTCCTTAATATTTCATGATGGAAGACTAGCATTCTTGCCAACTCCTTTAGCAACACTCTTTATGTTCATGTGGCTTCCAATTGGATTTGTGATGGCCCTTTACAGAATTTTTCTGGGTGTGTTCCTTTGTTTCAAATTCACAATGGCATTGGGAGTGTGGAGTGGGATAAATCTGAATTTCAAAGACAATAACCAGCAAAAATCAAAGTCAAATGAAGGGGTGCTTTATGTTTGCACTCACAGGACTCTCTTGGATCCAATTTTTCTTAGCTCATGTTTGGGGAGGCCTTTGACTGCAGTCACATACAGCTTAAGCAAGGTGGCTGAGTTTATAGCCCCTATTAGGACCATAAGACTCACAAGGGACAGAAAACAAGATGGGGAGACTATGAAAAGGTTGCTTAGTGAAGGGGATTTGGTGGTGTTCCCTGAAGGAACAACTTGTAGGGAGCCCTATCTGTTGAGGTTCAGTTCCTTGTTTGCAGAACTAGCTGATGAGATTGTGCCTGTGGCTATGAAGGCTCAAGTGAGCATGTTCTATGGGACCACAGCAAGTGGCCTAAAGGTGTTGGATCCAATTTACTTTTTCATGAACCCTAGGCCTAGATATGACATTGAGATCCTTGAAAAGGTTCCCAAAGAACTCACTTGTGCTGGGGGAAGGTCTAGTCATGAAGTGGCAAATTACATACAGAAACAATTGGGGTATGCTTTGGGATTTGAGTGCACCAACCTTACAAGGAGGGATAAATATATGATGCTGGCTGGGAATGAAGGGGTTGTTCAAGAAAAGAAGGGAAGAATATTCAGCTAA 1599 0.4209 MVSSMEFLRLANWLMNQVLVKSCYGIARKIKNHGFQWGDLSSKPLQQPSSFPNIIKCDLEDRGSQTLVCDFHKVLLRTHSFFPYFMLVAFEGGSIFRAFLLLCSCPILWILNYEMKLRVMIFISFCGLKVKDMENTSRAVLPKFYLENLNLEAYEVVASVGSRVIFTTMPRVMVEGFLKEYLNADAVIATELHTAGCYFTGLLSKSGLLVKHSALMDYFGDTKPDLGIGNTSLHDQLFISLCKEAYVVMNEGKVIPRNKYPKSLIFHDGRLAFLPTPLATLFMFMWLPIGFVMALYRIFLGVFLCFKFTMALGVWSGINLNFKDNNQQKSKSNEGVLYVCTHRTLLDPIFLSSCLGRPLTAVTYSLSKVAEFIAPIRTIRLTRDRKQDGETMKRLLSEGDLVVFPEGTTCREPYLLRFSSLFAELADEIVPVAMKAQVSMFYGTTASGLKVLDPIYFFMNPRPRYDIEILEKVPKELTCAGGRSSHEVANYIQKQLGYALGFECTNLTRRDKYMMLAGNEGVVQEKKGRIFS* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0349 532 SMART plsc_2 336 437 IPR002123 GO:0016746
Pvu6g0349 532 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 1 20 526 - -
Pvu6g0349 532 CDD LPLAT 326 496 - -
Pvu6g0349 532 Pfam Acyltransferase 324 431 IPR002123 GO:0016746
Pvu6g0349 532 PANTHER ANCIENT UBIQUITOUS PROTEIN 20 526 - -
Pvu6g0349 532 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 259 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0349 Pvu-Chr6 13591878 13594483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0349 10 524 Acyl Lipid Metabolism Gene Families AT1G06520 56.424 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0349 K13508 - gmx:100786742 950.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0349 6 13591878 13594483 Pvu8g2793 8 58044223 58046591 PCT
Pvu8g1990 8 49830490 49833040 Pvu6g0349 6 13591878 13594483 PCT