Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0329 ATGAACCCATCCACAAGGAAACCTATTGGAAGGCCCCGAGGCTCCAAGAACAAGCCAAGCTCCACCTTCCTCCCAGTGCCCCAGCCTGAGGAGTCCTCCATGAAGGTCTTTGCTTTCACTGTACCTCCAAATAGGGACATCATGGAGTTCATCTTGGACATTGCTCATAAGGGTCACGTCAGTGTGGCCATCCTAAATGCCTCTGGCACTGTTAACAACGTCACCTTGCAGAACTCAACCCTCAGTGCCCCTACCACCATGCAACACGGTCCCTTCACTTTGCTCTCCCTTGCTGGTTCCTACTTGTACAACAACCTCTATACCCTTCACCCCGGAGCCACCCCTCCCTTTCCCCTATCTTTCACCATCAACCTCTCAAACTCTCATGGCCAGATATTTGGAGGTGTGGTTACTGGTAGTGTCATTGCTGCTGAACATGTCAGAATCACGGTCTCCACCTTCAAGAACACTGGTATTCTAAAGTTTCCTCGAGATCAACAAACACATGACAATAATAACCATGACAATAACAACAACAACACTAGTAATTTCAGCGGGGGTGGCAACTTGTTGGGGTCCAACACAGTTAACTATGGAGTTCGTGGGTGGTAA 612 0.4902 MNPSTRKPIGRPRGSKNKPSSTFLPVPQPEESSMKVFAFTVPPNRDIMEFILDIAHKGHVSVAILNASGTVNNVTLQNSTLSAPTTMQHGPFTLLSLAGSYLYNNLYTLHPGATPPFPLSFTINLSNSHGQIFGGVVTGSVIAAEHVRITVSTFKNTGILKFPRDQQTHDNNNHDNNNNNTSNFSGGGNLLGSNTVNYGVRGW* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0329 203 Gene3D - 33 179 - -
Pvu6g0329 203 MobiDBLite consensus disorder prediction 163 188 - -
Pvu6g0329 203 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 4 188 - -
Pvu6g0329 203 SUPERFAMILY AF0104/ALDC/Ptd012-like 32 166 - -
Pvu6g0329 203 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 4 188 IPR014476 GO:0003680
Pvu6g0329 203 MobiDBLite consensus disorder prediction 1 28 - -
Pvu6g0329 203 ProSiteProfiles PPC domain profile profile. 31 176 IPR005175 -
Pvu6g0329 203 CDD DUF296 35 143 IPR005175 -
Pvu6g0329 203 Pfam Plants and Prokaryotes Conserved (PCC) domain 36 155 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0329 Pvu-Chr6 12982633 12983244 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0329 6 200 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 31.343 2.15e-23 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0329 - - pvu:PHAVU_006G031200g 375.941