Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0327 ATGACTACCAATAAGTCTCTCATGACTCCATCTGCAAGAAGGTCAACTGGAAAAATCCATGGCTCAAAAAACAAGTCAAGGTCCAACTCTCTTCCAATGACTCAATCCACTGATTCTTCTGTGAATGTCTTCACTTTTAACGTGGCTCCCAATAGTGATGTCATGGAGTGTATCTTTGACATTGCTAATCGAGACCAGGTTAGTGTTACTGTGATTGGTGCCTCTGGCAGAATCAATAATGCGACTCTTCAGTCTTCAACCTGCAGTGCACCCAATTTCGTGCTCCATGGACCCTTCACCTTGATCTCCCTCACAGGCTCCTACTTATACAACAATCAATACACCCTTCACCCTGGAGCCACCCCTCCCCTAAACTTATCCTTTGGGATCAACCTCTCCACCAATGGAGGCAAGGTCTTTTGTGGCATTGTCGGTGGTAGCATCATTGCTCGTGAGAATGTCAAGATCACCGTCTCCACCTATAGGAACCCTCATGTTTTAAAGTACACTGTTGAAGGTCAAGATGAGGGTGATAGTCATAGTGACGATAATGAAAATCACACCAGTAACAACAAGCTTTATAAGAATAACCCTAGTAATTATAGTGAAAATAGTAATTTTATGGATTTCAACCCAATGAGTTTCGGAGTTTGTGGATGA 660 0.4288 MTTNKSLMTPSARRSTGKIHGSKNKSRSNSLPMTQSTDSSVNVFTFNVAPNSDVMECIFDIANRDQVSVTVIGASGRINNATLQSSTCSAPNFVLHGPFTLISLTGSYLYNNQYTLHPGATPPLNLSFGINLSTNGGKVFCGIVGGSIIARENVKITVSTYRNPHVLKYTVEGQDEGDSHSDDNENHTSNNKLYKNNPSNYSENSNFMDFNPMSFGVCG* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0327 219 SUPERFAMILY AF0104/ALDC/Ptd012-like 39 165 - -
Pvu6g0327 219 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 8 189 IPR014476 GO:0003680
Pvu6g0327 219 CDD DUF296 42 150 IPR005175 -
Pvu6g0327 219 MobiDBLite consensus disorder prediction 1 37 - -
Pvu6g0327 219 ProSiteProfiles PPC domain profile profile. 38 186 IPR005175 -
Pvu6g0327 219 Gene3D - 40 176 - -
Pvu6g0327 219 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 189 - -
Pvu6g0327 219 MobiDBLite consensus disorder prediction 173 200 - -
Pvu6g0327 219 MobiDBLite consensus disorder prediction 173 189 - -
Pvu6g0327 219 Pfam Plants and Prokaryotes Conserved (PCC) domain 43 160 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0327 Pvu-Chr6 12926394 12927053 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0327 13 188 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 25.843 1.25e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0327 - - vun:114188422 221.09