Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0325 ATTCAAGATTACATGTTTGAGGAGAGTGTTTGTCTGCTACTTAGGGGCTCATGGTTCAAACCTTTATCGGTTGAAGAACATGTGGTTCACGAAGATGCATATGAGGAACTCGAAGAGTATTATCCGTATGAGGATGAGGAAATGGAGGAAGCTTATTATGGTGGTTCGTCTAGTGTTCGGATTGGCAACTGCAGATGGGGAGATAACGGTTATGTTAGGGGTGGTCGCCAAGAAGCTCGGCCGGTTCACCGGTCGAACTTCCAGGATTCAGGAGCCAGTTCATCGAGGGAGCCAAAAAAGAAAGATGCAGGGAAGGGTAGCACAGGCAGAAGGGCCAAGAGGACACAGAAAAGGGAAGCTGCTGATAAGGCGGCTGAAGCAAAACATGGCAGCTTTCGGTAA 402 0.4826 IQDYMFEESVCLLLRGSWFKPLSVEEHVVHEDAYEELEEYYPYEDEEMEEAYYGGSSSVRIGNCRWGDNGYVRGGRQEARPVHRSNFQDSGASSSREPKKKDAGKGSTGRRAKRTQKREAADKAAEAKHGSFR* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0325 133 MobiDBLite consensus disorder prediction 72 133 - -
Pvu6g0325 133 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 129 - -
Pvu6g0325 133 MobiDBLite consensus disorder prediction 94 133 - -
Pvu6g0325 133 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0325 Pvu-Chr6 12895657 12896058 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0325 1 129 C3H Transcription Factor Family AT5G19430 52.778 2.87e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0325 - - pvu:PHAVU_006G030800g 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0325 6 12895657 12896058 Pvu6g0325 6 12895657 12896058 ECH