Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0305 ATGAAATGGTGTGATTGCTGTTTCCCTCTCAGAGTGTTTCTGGTTTCTTTCATATCCTACTCCTCTGAGCCACTTCTCTCACAAATGGCTACCCTTTCTTCTTCCAGTTTTGTACCATTTTGCATGCTCTTGTTCCTTGTGTCTCTCACTAGTCCTGCTTATGTTTCTTCAGTTCCACTTTCCTTGAGAAGGCAAGCTTCTATGCTTGTTTCTATGAAGCAAGATTTTGGAGTTGCTAACTCTTCTCTCAGAAGCTGGGACATGTCAAACTACTTGTCCCTTTGCAGTTGGTATGGCATTCAGTGTGACCATGACAACAGGTCTGTGGTGTCACTTGACATATCCGGTTTGAATGCTTCAGGTTCAGTTTCACCTGCCATCACAGGACTCTTGAGCCTTGTGAGTGTGTCACTCCAGGGAAATGGCTTCTCTGGGGAGTTTCCAAGTGACATCCACAAGCTACCAAGGCTGAGGTTCCTCAACATCTCTGTGAACATGTTCAGTGGGAATTTGAGTTGGAAATTCTCCCAGCTAAAGGAGCTTGAAGTGGTGGATGTTTATGACAATGCTTTCAACGGCTCACTTCCTCTGGGTGTCACTGATCTCCCAAAGATCAAGCACTTGAACTTTGGAGGGAACTACTTCTCTGGGGAAATCCCTCTAAGCTATGGAAACATGTGGCAGCTAAACTTTCTGTCCCTTGCAGGAAATGATTTGAGAGGATTCATACCAAGTGAGCTTGGGAATCTCACCAACCTCACTCATCTTTTCTTGGGATACTATAATCAGTTTGATGGTGGAATCCCTCCTCAGTTTGGTAAGCTGACCAATTTGGTTCATCTAGACATTGCAAACTGTGGCTTGACAGGTCCAATTCCTGTTGAGTTGGGAAACCTCAAGAAGTTAGACACTCTCTTCTTGCAAACCAATCAGCTAAGTGGTTCAATCCCTCCCCAGCTAGGAAACTTGACTAGATTAAAAGCTCTTGATCTATCATTCAACATGCTCACAGGAGGCATCCCTGATGAGTTCTCAGCCCTTCAAGAGCTTACCCTCTTGAACTTGTTTATAAACAAGCTGCATGGAGAAATTCCTCACTTCATTTCTGAGCTACCAAACTTGGAGACTCTGAAGCTTTGGCAGAACAACTTCACTGGAGTGATTCCTTCAAATCTTGGCCAGAATGGCAGGTTGGTTGAGCTTGACTTGTCAACAAATAAGCTCACTGGTTTGGTACCAAAATTTCTGTGCCTTGGAAAGAGGCTGAAAATTTTGATTCTGCTCAAGAACTTTCTGTTTGGATCTTTGCCTGAGGATCTTGGTCAATGCCACACACTCCAAAGAGTCCGTTTGGGTCAGAACTATTTAACCGGGCCATTGCCACACGAGTTTCTCTATTTGCCTGAACTATTACTTGTGGAGCTGCAAAACAATTATCTCAGTGGTGGCTTCCCACAATCAGCAAGCAGCACACCCTCCAAACTAGCACAATTGAACCTATCAAACAACCGCTTCTCAGGGTTTCTTCCAGCCTCAATTTCAAATTTTCCAAACTTGCAAATTCTTCTCCTTAGTGGAAACAGATTCTCTGGAGAAATCCCACCAGTTATAGGGAGTTTGAAAAGTATCCTCAAGTTGGATATAAGTATCAACAACTTTTCAGGTACTATTCCACCCGAGATAGGTAATTGTGTCTTACTCACCTATTTAGATTTCAGCCAAAACCAACTATCAGGTCCCATTCCTGTCCAAATTGCTCAAATTCACATATTAAACTATCTTAATGTGTCATGGAACCACCTAAACCAAAGCCTTCCCAAGGAACTTAGGGCCATGAAGGGCTTAACTACAGCAGATTTCTCTCACAACAACTTCTCAGGTTCAATACCCGAGGGGGGGCAATTCTCAATCTTTAATTATACATCCTTTGTAGGTAACCCTCAGCTATGTGGTTATGACTCCAAGCCATGCAACCTTTCTTCAACAGCTACTTTGGAGTCTCAAGAAAAAAAGAGTGCAAAACCAGGGGTCCCAGGGAAGTTCAAGTTCCTTTTTGCATTGGCATTGTTGGGGTGCTCATTGGTGTTTGCAACCTTGGCCATCATCAAGAGTAGAAAGACTAGGAGGCACACCAATTCATGGAAGTTAACAGCATTCCAGAAGCTGGAGTATGGGAGTGAGGACATCATAGGGTGCATAAAGGAAAGCAATGTCATAGGAAGAGGTGGATCTGGGGTTGTGTACAGAGGAACCATGCCAAATGGAGAGGAAGTGGCAGTGAAGAAGCTGTTGGGAATCAACAAAGGATCTTCCCATGACAATGGCCTCTCTGCAGAAATAAGAACATTAGGTAGAATCAGACACAGGTACATTGTGAGGTTGCTAGCATTTTGCTCAAACAGAGAGACCAATTTGCTTGTCTATGATTACATGCCAAATGGAAGCTTGGGGGAAGTCTTGCATGGGAAGAGAGGTGAGTTTCTCAAGTGGGACACCAGGCTCAAAATAGCCATAGAAGCTGCAAAAGGACTTTGTTATTTGCACCATGATTGTTCCCCTTTGATAATCCATAGAGATGTCAAGTCAAACAACATACTTCTGAACTCTGATTTTGAGGCTCATGTTGCTGATTTTGGGCTTGCCAAGTTCATGCAAGATAATGGGGCATCAGAGTGCATGTCTTCCATTGCTGGTTCCTATGGCTATATTGCTCCAGAATATGCATACACATTGAAAGTGGATGAGAAAAGTGATGTTTACAGCTTTGGAGTGGTGCTGCTAGAACTCATAACAGGGAGAAGGCCAGTGGGGAACTTTGGGGAAGATGGATTAGACATTGTTCAATGGATCAAGATGCAAACAAATGGGAACAAAGAGATGGTGATGAAGATCCTTGATGAGAGGCTACATCAAATTCCTTTGGCTGAAGCAAAGCAGGTGTTTTTTGTGGCAAAGTTGTGTGTTCATGAACACAGTGTGGAGCGACCAACCATGAGAGAAGTGGTTGAAATGCTTGCACAAGCTAAACAACCAAATACATTTCAAATGCAGTGA 3054 0.4345 MKWCDCCFPLRVFLVSFISYSSEPLLSQMATLSSSSFVPFCMLLFLVSLTSPAYVSSVPLSLRRQASMLVSMKQDFGVANSSLRSWDMSNYLSLCSWYGIQCDHDNRSVVSLDISGLNASGSVSPAITGLLSLVSVSLQGNGFSGEFPSDIHKLPRLRFLNISVNMFSGNLSWKFSQLKELEVVDVYDNAFNGSLPLGVTDLPKIKHLNFGGNYFSGEIPLSYGNMWQLNFLSLAGNDLRGFIPSELGNLTNLTHLFLGYYNQFDGGIPPQFGKLTNLVHLDIANCGLTGPIPVELGNLKKLDTLFLQTNQLSGSIPPQLGNLTRLKALDLSFNMLTGGIPDEFSALQELTLLNLFINKLHGEIPHFISELPNLETLKLWQNNFTGVIPSNLGQNGRLVELDLSTNKLTGLVPKFLCLGKRLKILILLKNFLFGSLPEDLGQCHTLQRVRLGQNYLTGPLPHEFLYLPELLLVELQNNYLSGGFPQSASSTPSKLAQLNLSNNRFSGFLPASISNFPNLQILLLSGNRFSGEIPPVIGSLKSILKLDISINNFSGTIPPEIGNCVLLTYLDFSQNQLSGPIPVQIAQIHILNYLNVSWNHLNQSLPKELRAMKGLTTADFSHNNFSGSIPEGGQFSIFNYTSFVGNPQLCGYDSKPCNLSSTATLESQEKKSAKPGVPGKFKFLFALALLGCSLVFATLAIIKSRKTRRHTNSWKLTAFQKLEYGSEDIIGCIKESNVIGRGGSGVVYRGTMPNGEEVAVKKLLGINKGSSHDNGLSAEIRTLGRIRHRYIVRLLAFCSNRETNLLVYDYMPNGSLGEVLHGKRGEFLKWDTRLKIAIEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKFMQDNGASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGNFGEDGLDIVQWIKMQTNGNKEMVMKILDERLHQIPLAEAKQVFFVAKLCVHEHSVERPTMREVVEMLAQAKQPNTFQMQ* 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0305 1017 SUPERFAMILY RNI-like 111 448 - -
Pvu6g0305 1017 ProSitePatterns Protein kinases ATP-binding region signature. 739 762 IPR017441 GO:0005524
Pvu6g0305 1017 SUPERFAMILY L domain-like 338 665 - -
Pvu6g0305 1017 Gene3D Ribonuclease Inhibitor 62 220 IPR032675 -
Pvu6g0305 1017 SMART serkin_6 733 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0305 1017 Gene3D Ribonuclease Inhibitor 320 397 IPR032675 -
Pvu6g0305 1017 Gene3D Transferase(Phosphotransferase) domain 1 811 1017 - -
Pvu6g0305 1017 Pfam Leucine Rich Repeat 325 347 IPR001611 GO:0005515
Pvu6g0305 1017 Pfam Leucine Rich Repeat 495 516 IPR001611 GO:0005515
Pvu6g0305 1017 SMART LRR_typ_2 516 540 IPR003591 -
Pvu6g0305 1017 SMART LRR_typ_2 396 417 IPR003591 -
Pvu6g0305 1017 SMART LRR_typ_2 299 322 IPR003591 -
Pvu6g0305 1017 SMART LRR_typ_2 323 347 IPR003591 -
Pvu6g0305 1017 SMART LRR_typ_2 371 395 IPR003591 -
Pvu6g0305 1017 Pfam Protein tyrosine and serine/threonine kinase 735 1005 IPR001245 GO:0004672|GO:0006468
Pvu6g0305 1017 ProSiteProfiles Protein kinase domain profile. 733 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0305 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 855 867 IPR008271 GO:0004672|GO:0006468
Pvu6g0305 1017 Pfam Leucine rich repeat N-terminal domain 65 103 IPR013210 -
Pvu6g0305 1017 SUPERFAMILY Protein kinase-like (PK-like) 727 1005 IPR011009 -
Pvu6g0305 1017 Gene3D Phosphorylase Kinase; domain 1 702 810 - -
Pvu6g0305 1017 PANTHER UNNAMED PRODUCT 40 1014 - -
Pvu6g0305 1017 Gene3D Ribonuclease Inhibitor 398 661 IPR032675 -
Pvu6g0305 1017 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 40 1014 - -
Pvu6g0305 1017 Gene3D Ribonuclease Inhibitor 221 319 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0305 Pvu-Chr6 12372351 12376922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0305 51 1007 Receptor kinase-like Gene Family AT5G65700 56.816 0.0 1083
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu6g0305 PK_Tyr_Ser-Thr 4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0305 - - gmx:100803075 1786.16