Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0294 ATGGCTATGGTTCTTGATGCTGTTCTTGGAAAAGTGCTTGATGAACTGCTGAAGACTGTTGTGGAAATGAAAGACAGGGCAGTGAAGTTCAGATCCACCCTAGAAAAATTGCATGCCACCCTCCAAACAGTAGAACCTGTGGCTAGGAAGATAGATGGTATTAACAAGCGATTGGATAAACCAGCTAAGGAAACGAAGAAGCTGATTGATCAGATAGAGAAGGGGAAGGAGCTTGTTAAGGAGTGCTCCAAAGTTGATTGTTGGAATTTCTGTTATAAGGCGAATTCCCAAGAGAAACTTCAAGAGTTGATCGATTCTATTTATCTGTACTTTCAATTAGATATGCAAGGAAATATAAACGTCACTGTGTTGGAAAACCAGGTGCTGCTGACCGAGATTCATGCGACGCTTGTGGGGAATGCTCCGAGAAGGATTGGATTAAAAGGCTTGTGCTCTCCACCTGAACCCCCTGCTTTCACTGTTGGGTTGGATGTTCATTTGAGGGAGTTGAAATTCAAGTTGCTGAAGGATCATCATGTGGGCTCAGTGCTGACAGTGACAGGAACAGGAGGTTCGGGAAAGTCAACGTTGGCCAAGAAGTTTTGTTCTGATGAGGAAGTTAAAGGTAAATTCATGGACAACATATTCTTCATCTCCTTAGCGGAAGCGCCCAAGGTAAGCACCATAGTGGAGAGACTGTTTGAACACAATGGTTACCAGAAGCCAGAGTTTCAAAGTGATGAGGATGTAGCTTATCAATTGGAAAATTTGCTAAAACAGATTGGGAAAACCCCCATGTTGTTGGTCCTTGACGGTGTTTTGCCAAAGTCAACATCTCTAGTTGAGAAATTCGTGTTTCAGATCCCAGACTACAAGATTTTAGTGACATCAAGATTCACAATTAAAGGATTTGGGGAGCCATACGTGTTGAAATCACTTAATGAAGCCGATGCTTTAAACTTATTTCGCCACTATGCATCCCTGGATCAGACTAGCTCTAACATTCCCGATAATGTTGTCAAGAAGATAGCAAAAGGGTGCAGGGGTTCTCCCTTGGCTCTTTTGGTGACTGGAAAATCTTTAAGTCTTGAAGCACCAGTGGTTTGGCACAACAGGGCGAAGACATTGTCGAAGGGTCATTCTGTTCTTACTTACAGTTCTAGTCAGGATGTGCTTTTTACTTGCCTCCAAAAAAGCTTTGATGATTTGGATGCTAAGGTGGCTGAGAGTTTTACGGACCTGAGCTTGTTTCCTGAAGCACAGAAGATACCCGCTGCAGCACTTGTTGATATATGGGCAGAACAGCGTGATGAAGACGATGACACTGCAATGGAGAATATACATGAACTTGTCAAAAGGAACGTGGCTGATATGGTTGTCACAAGGAGTTCTGCAAGTGGCATAGGTGACTACAATTACCACTATGTTACGCAGCATGGTCTTCTTCGGGACATAGCCATCCTTCAAACAAGTAAGTTACCGACGGAAAAGAGTCATAGACTAATAATTGACCTAAGAGGGAACCATATTCCCAAATGGTGGACTACAAAGAATGAGTATCACATTGCAGCCCACACATTATCCATCTCAACTGATGAAGAATTCACTTCAGAGTGGTGCAACTTGCAGCCAAATGAGGTTAAGGTTCTAGTGATGAACCTTAGAGAAAAGAAGCACTCACTACCGATGTTCATGGAGAAAATGAATAAATTAAAAGTCCTGATAATAACGAATTATGACGTCAATCGTGCTGAGTTGGAGAATTTAGAGCGGCTTGATTATCTTTCTGATCTCAAACGAATCAG 1805 0.4244 MAMVLDAVLGKVLDELLKTVVEMKDRAVKFRSTLEKLHATLQTVEPVARKIDGINKRLDKPAKETKKLIDQIEKGKELVKECSKVDCWNFCYKANSQEKLQELIDSIYLYFQLDMQGNINVTVLENQVLLTEIHATLVGNAPRRIGLKGLCSPPEPPAFTVGLDVHLRELKFKLLKDHHVGSVLTVTGTGGSGKSTLAKKFCSDEEVKGKFMDNIFFISLAEAPKVSTIVERLFEHNGYQKPEFQSDEDVAYQLENLLKQIGKTPMLLVLDGVLPKSTSLVEKFVFQIPDYKILVTSRFTIKGFGEPYVLKSLNEADALNLFRHYASLDQTSSNIPDNVVKKIAKGCRGSPLALLVTGKSLSLEAPVVWHNRAKTLSKGHSVLTYSSSQDVLFTCLQKSFDDLDAKVAESFTDLSLFPEAQKIPAAALVDIWAEQRDEDDDTAMENIHELVKRNVADMVVTRSSASGIGDYNYHYVTQHGLLRDIAILQTSKLPTEKSHRLIIDLRGNHIPKWWTTKNEYHIAAHTLSISTDEEFTSEWCNLQPNEVKVLVMNLREKKHSLPMFMEKMNKLKVLIITNYDVNRAELENLERLDYLSDLKRI 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0294 601 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 413 IPR027417 -
Pvu6g0294 601 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Pvu6g0294 601 PANTHER LRR AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1 601 - -
Pvu6g0294 601 Pfam NB-ARC domain 166 401 IPR002182 GO:0043531
Pvu6g0294 601 PRINTS Disease resistance protein signature 183 198 - -
Pvu6g0294 601 PRINTS Disease resistance protein signature 260 274 - -
Pvu6g0294 601 PRINTS Disease resistance protein signature 347 361 - -
Pvu6g0294 601 Gene3D - 400 487 IPR036388 -
Pvu6g0294 601 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 1 601 IPR039203 GO:0050832
Pvu6g0294 601 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 7 122 IPR008808 -
Pvu6g0294 601 Gene3D - 150 303 IPR027417 -
Pvu6g0294 601 Gene3D - 312 399 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0294 Pvu-Chr6 12002311 12005584 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0294 186 423 WRKY Transcription Factor Family AT5G45050 24.400 2.50e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0294 - - pvu:PHAVU_006G0279000 1170.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0294 6 12002311 12005584 Pvu6g0294 6 12002311 12005584 ECH