Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0265 ATGAAGAATTCTAAGAAAACGGGTGTACGGAAATACCAAAAATCGGAAAATCCACGCTTGCGATGGACACCTGAACTCCATGAATACTTTGTTGAAGTTGTGGAAGGTCTTGGTGGAAAAAACAAGGCAACTCCAAAGAGCATTCTGCAGATGATGCATGTGAAAGGACTAAGAATCTCTCACATTAAAAGCCATCTTCAGATGTACAGGAACCTGAAGGGACATATGATTCTCTCATCAATGCATGAGAAGATGGAAGGGAATGAAGAAGTTAAAGATCTCCCAATGTACTCCAATTGTTCATCCCAAAGATCACAAGAAAAATTTAGAACATCAAAATATGATACGGGGATTGTGACTCAACAAACTCGCACGTTAGAAAATAAAGGACTTTCACAAAGCAGTGAAACAGATTACGATCTAAACCAGGAACCCGAATCATGTTACATACATAGTGATACGTCAAATGAAGAAAATAGTAGGACAATGAAATTTCTTGATCTCTCATTCTCTTTTAGCTCTCAACTATTTCCAACTATGCATGGTAATCAAGAAAGGATGCATTTTTCTTCACCAAATACAGCAGATAATCATGCCCTCGATTCTAATCCTGTACAATCTCATGGGACCAATTACATAAATTTAGACCTAGCAATATGA 660 0.3742 MKNSKKTGVRKYQKSENPRLRWTPELHEYFVEVVEGLGGKNKATPKSILQMMHVKGLRISHIKSHLQMYRNLKGHMILSSMHEKMEGNEEVKDLPMYSNCSSQRSQEKFRTSKYDTGIVTQQTRTLENKGLSQSSETDYDLNQEPESCYIHSDTSNEENSRTMKFLDLSFSFSSQLFPTMHGNQERMHFSSPNTADNHALDSNPVQSHGTNYINLDLAI* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0265 219 Gene3D - 17 73 - -
Pvu6g0265 219 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 17 71 IPR006447 GO:0003677
Pvu6g0265 219 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 74 IPR017930 -
Pvu6g0265 219 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 8 139 IPR044848 GO:0003700
Pvu6g0265 219 Pfam Myb-like DNA-binding domain 20 70 IPR001005 -
Pvu6g0265 219 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 8 139 - -
Pvu6g0265 219 SUPERFAMILY Homeodomain-like 16 71 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0265 Pvu-Chr6 11402652 11408495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0265 8 70 G2-like Transcription Factor Family AT1G14600 68.254 1.74e-24 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pvu6g0265 Myb_DNA-binding 2.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0265 - - vun:114187568 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0265 6 11402652 11408495 Pvu6g0265 6 11402652 11408495 ECH
Pvu6g0265 6 11402652 11408495 Pvu8g2033 8 50393457 50396966 PCT