Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0256 ATGGTAACCATCAAAGCATCTTACACAGTAGTTCCAAATCAACCAACTCCAGAGGGCATTCAATGGCTGTCTGATATTGATCAAGTGGCGCGTCTGCACCACACTCCCACCATCTACATTTACCACGCAAAGCACAACCATGGCACATTAATTCAACAGATGAGAAACTCTCTTAGCAAGATTTTGTGCCACTACTATCCATTGGCTGGTAGATTGAGAAAGTTAGAAGAAGGTGGCAGATTGGAATTGGATTGTAATGCAAAAGGAGTGGTGTTGATTGAAGCAGAATCCACAAAAACAGTGCAAGATTATGATGACTTTTTCGGTGAATCCATCAAGGATTTGGTTCCAACAGTTGATTACACAAAAATCCTAATTCAGGAACTTCCCTTGTTACTGGTGCAAGTAACAAGTTTCCTTGGCCATGAAGCATTTTCCATTGGAGTTGCTATCAGTCATATCTTGTGTGATGGTGTTGCTGGTGTTCAGTTCATCAATTCATGGGCAAAGTTGGCTCGTGGAGACACATTAGAGCCTCATGAAATGCCCTTTCTGGATCGAACTGTGCTCAGATTCATAGCCCCTCCATCACCCCAACGCTTTGATCATCTAGAGTTCAAGCCTTTGCCTCTCATATTGGGAAGATGTGACAACACTGCTGAGAAAAACAAAAGGGTAAAGGCCACCTTGTTGAAGCTGACAGCAGAACAAGTGGGGAAACTGAAGAACAAGGCCAATGCTGATGAATCAACAAAAGGGTCAAGACCTTATAGCAGATTTGAAGCTATTGCTGCACATGTATGGAGATCTGCATGTAAGGCTCGTGGATTAGATGAAAATCAACCAACTGTTGTTCGGTTCAATGCTGATATTCGCAATAGACTCATTCCACCTCTCCCTGCGAATTACTTTGGGAATGCTTTGGCCTTAACAGCAGCATCATCACAAGTTGGAGAAATCTTATCAAATTCTTTGGGTCGTGCTGCTAAGAAAATAAGGGAAGCAATTGAAGTTCTTACATATGAGTATATAAGCTCACAGATAGATGTTATTAGAGGCCAGGACCATGTGGATAAAGCAAGGGCTTTGTACTTTGGAGCAAATGAAGGTAAGGATGCATTGTTTTTTGGGAACCCTAACCTTCTTATTACAAGTTGGATGAGGATGCCAATGCATGAAGCAGATTTTGGTTGGGGAAAGGCTGTATATTTAGGTCATGCAGGTGTGGCTACACAAGATAGGGCATTGATTACTCAAAGTTTGGATGGGGATGACTCTATTATTGTGTTTCTACCCTTTCAAATGGAACATATGCAGCTTTTCAAGGATTTTTTTTATGAAGAAATATAA 1350 0.4141 MVTIKASYTVVPNQPTPEGIQWLSDIDQVARLHHTPTIYIYHAKHNHGTLIQQMRNSLSKILCHYYPLAGRLRKLEEGGRLELDCNAKGVVLIEAESTKTVQDYDDFFGESIKDLVPTVDYTKILIQELPLLLVQVTSFLGHEAFSIGVAISHILCDGVAGVQFINSWAKLARGDTLEPHEMPFLDRTVLRFIAPPSPQRFDHLEFKPLPLILGRCDNTAEKNKRVKATLLKLTAEQVGKLKNKANADESTKGSRPYSRFEAIAAHVWRSACKARGLDENQPTVVRFNADIRNRLIPPLPANYFGNALALTAASSQVGEILSNSLGRAAKKIREAIEVLTYEYISSQIDVIRGQDHVDKARALYFGANEGKDALFFGNPNLLITSWMRMPMHEADFGWGKAVYLGHAGVATQDRALITQSLDGDDSIIVFLPFQMEHMQLFKDFFYEEI* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0256 449 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 449 - -
Pvu6g0256 449 Gene3D - 215 447 IPR023213 -
Pvu6g0256 449 Pfam Transferase family 1 446 - -
Pvu6g0256 449 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 449 - -
Pvu6g0256 449 Gene3D - 1 208 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0256 Pvu-Chr6 11100709 11104883 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0256 2 447 Monolignol Biosynthesis Gene Families AT5G48930 36.384 8.21e-91 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0256 K13065 - gmx:100778626 704.131