Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0255 ATGGTTCCTAATTGTCTGATTCGAACGTTAAGTCCATCATTCACAAACCAAAAAACTACCCAAATTCTATTGGGCTCTCTGCTGCAACACAAACCCAATGCTTTCCTTTTATACTTCAAATACTTCACTTCAAGCACCACTTTTGATTCTGAATCAGATGGAAATCACCACAAAGATGACACCTTTACCGTGTCTTATCTCATTAACTCATGTGGGGTGTCCCCAAAATTGGCCCGGGAACTCTCCAACAGGGTTAATTTGAAGAACTCAGATGGCCCTAATGCTGTTATTGATCTTCTCAGCAGCTATGGGTTCTCCAAATCCCAGATTGCAAAACTTGTGGAGAATAATCCCAAATTGATTTGTGCAAATGCCGAGAATACCCTTTTGCCGAAACTCAAGTTCTTCCGTTCTATTGGGGTTTCCGACACTGACTTGCCTAAGATCCTAATTAGAGGCCGTCATATCTTGTGCAGAAGCCTGGAAAAATGCCTCATTCCGCGTTATGAGATCCTAAGGAGCGCACTTCTTGACGATGAGGAAGTTCTTAGGTCTTTGAAAAGTTCCCCATTTGGTTTTTCATTTAGTGACACGAAAAAAAACTTGGTTCCAAACATTGAGGTTTTGAGGAAATGTGATGTGCCCCAATCTTCCATCTCTTACCTGATGACACATGCTGGAACTCTGGCCTACCGAGAACATTCCAAATTTGTGGAAGTTGTCAACACTGCTAAGGAAATTGGGTTTAATCCTTTGAGAGTAAATTTTATTGTGGCTATTGAAGTGCTTAGTAAGAGGAAGGCAGTGTGGGAATCAAGGTTTGAGATTTATGAGAGATGGGGATGGGACGGGGAAATGGCTCTTCGAGTAATTCGGAAGTTTCCTGCTGTTATAAAGCTGTCAGAGGAGACGTTTACCAAAAATATGAGTTTCCTTGTGAAGGAGATGGGTTGTCCATCAGAAGCTATTGCTGAATATCCTGTGGTGGTAGGTTACAACTTGGAGAAGAGGATTATCCCTAGATTTTCGGTTAACAAAATCTTGAAATCAAAAAGGATTCATTACAAGAAAAAAAAGGTTTTAATAAAAGTTATTTAG 1098 0.4053 MVPNCLIRTLSPSFTNQKTTQILLGSLLQHKPNAFLLYFKYFTSSTTFDSESDGNHHKDDTFTVSYLINSCGVSPKLARELSNRVNLKNSDGPNAVIDLLSSYGFSKSQIAKLVENNPKLICANAENTLLPKLKFFRSIGVSDTDLPKILIRGRHILCRSLEKCLIPRYEILRSALLDDEEVLRSLKSSPFGFSFSDTKKNLVPNIEVLRKCDVPQSSISYLMTHAGTLAYREHSKFVEVVNTAKEIGFNPLRVNFIVAIEVLSKRKAVWESRFEIYERWGWDGEMALRVIRKFPAVIKLSEETFTKNMSFLVKEMGCPSEAIAEYPVVVGYNLEKRIIPRFSVNKILKSKRIHYKKKKVLIKVI* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0255 365 Pfam mTERF 267 355 IPR003690 GO:0003690|GO:0006355
Pvu6g0255 365 Pfam mTERF 97 256 IPR003690 GO:0003690|GO:0006355
Pvu6g0255 365 PANTHER CGI-12 PROTEIN-RELATED 43 357 IPR003690 GO:0003690|GO:0006355
Pvu6g0255 365 Gene3D Transcription termination factor 3, mitochondrial 153 363 IPR038538 -
Pvu6g0255 365 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 43 357 - -
Pvu6g0255 365 SMART mt_12 288 319 IPR003690 GO:0003690|GO:0006355
Pvu6g0255 365 SMART mt_12 147 178 IPR003690 GO:0003690|GO:0006355
Pvu6g0255 365 SMART mt_12 219 250 IPR003690 GO:0003690|GO:0006355
Pvu6g0255 365 SMART mt_12 183 215 IPR003690 GO:0003690|GO:0006355
Pvu6g0255 365 SMART mt_12 111 142 IPR003690 GO:0003690|GO:0006355
Pvu6g0255 365 SMART mt_12 320 354 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0255 Pvu-Chr6 11060539 11061893 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pvu6g0255 mTERF 4.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0255 K15032 - gmx:100777030 471.47