Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0251 ATGTGTCATTACTTGGATATTTTAACTATCTCATTGTACCGTGCATCTCATTACATCCTCAATAGTGTGCTGTGTAGGCAAGAGCAAGTTCACTCAATGGTTCCTAATTTTCTGATTCAAACGTTAAGTCCATCATTCACAAACCACAAAACTACCCAAATTCTATTTGGTTCTCTGCTGCAACACAAACCTAATGCTTTCCTTTTATACTTCAAATACTTCACTTCAAGCACCACTTTTGATTCTGAATCAGATGGAAATCACCACAAAGATGACACCTTTACCGTGTCTTATCTCATTAACTCATGTGGGGTGTCCCCAAATTTGGCCCGGGAACTCTCCAACAGGGTTAATTTGAAGAACCCAGATGGCCCTAATGCTGTTATTGATCTTCTCAGCAGCTATGGGTTCTCCAAATCCCAGCTTGCAAAACTTGTGGAGAATAATCCCAAATTGATTTGTGCAAATGCCGAGAATACCCTTTTGCCGAAACTCAAGTTCTTCCGTTCTATTGGTGTTTCCGACACTGACTTACCGAAGATTGTAATTAGTGGCCGTCATATGTTGTCCAGAAGCCTGGAAAAATGCCTCATTCCGCGTTATGAAATCCTAAGGAGTGTACTTCTTGACGGTGAGAAAGTTGTTAGGTCTTTGAAAAGTGCCCCATTTGGTTTTTTGTTTGGTGACATGAAAAAACACTTGCTTCCAAACATTGAGTTTTTGAGGCAATGTGGTGTGCCTCAAGCTTCCATCTCTTACCTGATGATACATGCTGGGACTCTGGCCTACCGAGAACATTCCAAATTTGTGGAAGTTGTCAACACTGCTAAGGAAATTGGGTTTAATCCTTTGCGAGTAAATTTTATTGTGGCTATGGAAGTGCTTAGTAAGAGGAAGACATGGTGGGAATCAAGGTTTGAGATTTATGAGAGGTGGGGATGGGACCGGGAAATGGCCCTTCGAGTAATTCGGAAGTTTCCCGCTGTAGTAAAGTTGTCAGAGGCGACGTTTACCCAAAAAATGAGTTTCCTTGTGAAGGAGATGGGTTGTCCATCAGAAGCTATTGCTGAATATCCTGTGGTGGTAGGTTACAACTTGGAGAAGAGGATTATCCCTAGATTTTCGGTTATCAAAATCTTGAAATCAAAGGGTCTGCTTGAGAACAGTTTTCCATTTAGTTCTTTTATTTGCATAAATGAAAATACTTTTTTGGAGAAATTTGTTGTCAATTTTCAGAAAGATTTGCCTATAGTGAGAGATGTCTACAGCAGTTTGATCAAACAACAGAGTGTAATATAA 1299 0.4018 MCHYLDILTISLYRASHYILNSVLCRQEQVHSMVPNFLIQTLSPSFTNHKTTQILFGSLLQHKPNAFLLYFKYFTSSTTFDSESDGNHHKDDTFTVSYLINSCGVSPNLARELSNRVNLKNPDGPNAVIDLLSSYGFSKSQLAKLVENNPKLICANAENTLLPKLKFFRSIGVSDTDLPKIVISGRHMLSRSLEKCLIPRYEILRSVLLDGEKVVRSLKSAPFGFLFGDMKKHLLPNIEFLRQCGVPQASISYLMIHAGTLAYREHSKFVEVVNTAKEIGFNPLRVNFIVAMEVLSKRKTWWESRFEIYERWGWDREMALRVIRKFPAVVKLSEATFTQKMSFLVKEMGCPSEAIAEYPVVVGYNLEKRIIPRFSVIKILKSKGLLENSFPFSSFICINENTFLEKFVVNFQKDLPIVRDVYSSLIKQQSVI* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0251 432 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 69 424 - -
Pvu6g0251 432 PANTHER CGI-12 PROTEIN-RELATED 69 424 IPR003690 GO:0003690|GO:0006355
Pvu6g0251 432 SMART mt_12 215 247 IPR003690 GO:0003690|GO:0006355
Pvu6g0251 432 SMART mt_12 143 174 IPR003690 GO:0003690|GO:0006355
Pvu6g0251 432 SMART mt_12 179 210 IPR003690 GO:0003690|GO:0006355
Pvu6g0251 432 SMART mt_12 320 351 IPR003690 GO:0003690|GO:0006355
Pvu6g0251 432 SMART mt_12 352 386 IPR003690 GO:0003690|GO:0006355
Pvu6g0251 432 Pfam mTERF 301 403 IPR003690 GO:0003690|GO:0006355
Pvu6g0251 432 Pfam mTERF 129 334 IPR003690 GO:0003690|GO:0006355
Pvu6g0251 432 Gene3D Transcription termination factor 3, mitochondrial 204 415 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0251 Pvu-Chr6 10981758 10983581 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pvu6g0251 mTERF 1.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0251 K15032 - gmx:102670177 536.184