Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0243 ATGGTTGTGAAGGTGTATGGTCCAGACTATGGTAGCACTAAGGGAGTGTTATTGTGTCTGATTGAGAAGGAAGTTGAGTTTGAAACTGTGCATGTTGATGGCTTTAAGGGAGAGCACAAACAGCCTGAGTACCTCAAGATGCAGCCCTTTGGATTGTTTCCTGTTGTTCAAGATGGTGATTATGTTCTTTATGAATCACGGGCAATACTTAGGTATTTTGCAGAAAAATACAAAAATCAAGGGACAGATTTGCTGGGGAAGACCGTAGAAGATAGAGGTCTTGTGGAGCAATGGCTTGATGTTGAAGCACATAACTTTACTCCACCAATCTACAGCTTGGTCAAAATTTATTTTGCTTCTGTACTAGAGGGTGTTCCAGCAGACCCAAAGGCTATTAAAGAGAATGAAGAAAAGATTGAAAAATATCTTGACATTTATGAGAAAAGGCTATCCCAGACAAAGTACTTGGCAGGGGATTTCTTCAGTCTTGCTGATCTTAACCATCTTCCATTTACTTCTTATTTGATGAATGAAATGGAAAAAGGGTTTATGGTTAGAGAAAGGAAGCATGTCAGTGCTTGGTGGGATGATATTAGCAGCAGACCATCTTGGAAGAAGGTTCTCCAGGACTACAAAAACCCTTATGATGTGCTTAAAGAGATGAATTTAGTCAATTAG 678 0.3953 MVVKVYGPDYGSTKGVLLCLIEKEVEFETVHVDGFKGEHKQPEYLKMQPFGLFPVVQDGDYVLYESRAILRYFAEKYKNQGTDLLGKTVEDRGLVEQWLDVEAHNFTPPIYSLVKIYFASVLEGVPADPKAIKENEEKIEKYLDIYEKRLSQTKYLAGDFFSLADLNHLPFTSYLMNEMEKGFMVRERKHVSAWWDDISSRPSWKKVLQDYKNPYDVLKEMNLVN* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0243 225 CDD GST_N_Phi 2 76 - -
Pvu6g0243 225 SFLD Glutathione Transferase (cytosolic) 14 201 IPR040079 -
Pvu6g0243 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 81 IPR004045 -
Pvu6g0243 225 Gene3D - 86 208 - -
Pvu6g0243 225 CDD GST_C_Phi 90 208 IPR034347 -
Pvu6g0243 225 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 214 - -
Pvu6g0243 225 Pfam Glutathione S-transferase, N-terminal domain 15 74 IPR004045 -
Pvu6g0243 225 SUPERFAMILY Thioredoxin-like 5 81 IPR036249 -
Pvu6g0243 225 Pfam Glutathione S-transferase, C-terminal domain 128 202 IPR004046 -
Pvu6g0243 225 Gene3D Glutaredoxin 1 85 - -
Pvu6g0243 225 SFLD Main (cytGST) 14 201 - -
Pvu6g0243 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 223 IPR010987 -
Pvu6g0243 225 PANTHER GLUTATHIONE S-TRANSFERASE 2 214 - -
Pvu6g0243 225 SUPERFAMILY GST C-terminal domain-like 78 212 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0243 Pvu-Chr6 10661384 10662399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0243 1 214 Glutathione S-transferase Gene Family AT2G30870 58.140 1.30e-90 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0243 K00799 - gmx:100809406 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0243 6 10661384 10662399 Pvu6g0243 6 10661384 10662399 ECH
Pvu6g0243 6 10661384 10662399 Pvu8g2025 8 50299232 50300627 PCT