Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0238 ATGGGAAAAGGGTATGCTCCATGGCTCCTCTTTATTAATGAAGTCTTACTCTTGGTACACTTTTCTGCATGCAAAGTTCCTGCAATTATAGTGTTTGGAGACTCCTCAGTGGATTCAGGTAACAACAACTTCATTCCAACCATGGCTAGGAGCAACTTTCAACCTTACGGGAGAGACTTCTTCAATGGCAAACCTACTGGTAGGTTCTCCAATGGCAGAATCCCCCCTGACTTCGTCTCTGAGGCCTTTGGAATCAAGCAAGCAGTTCCTGCATACTTGGATCCTGCTTTCAGCATATCAGATTTTGCTACTGGTGTGTGCTTTGCTTCTGCAGGAACTGGATACGACAATGCTACTTCAAATGTTGCTGATGTGATACCTCTATGGAAAGAAGTAGAGTACTACAAGGAGTACCAAAAGAAATTGAGGGCACATCTTGGTGAGGAGAAGGCTAATGAAATACTAAGTGATGCATTGTATTTGGTTAGCATAGGAACCAATGACTTCCTTGAGAACTACTATGCCCTAACTGAAAGAAGGTCTGAGTTCCCCTTAGTTCAGCAGTATGAGGACTTCCTCTTAGGCCTTGCTAAAAACTTCTTCACTGAAATTTATGGGCTTGGGGCAAGGAAAGTTTCTCTCACTGGTTTGCCTCCTATGGGGTGTCTTCCACTAGAGAGAGCAATGAACATTTTGGAGTTCCATAATTGTGTGGAGGAGTACAACAATTTGGCTTTGGAGTTCAATGGAAAGTTGGGGTGGCTGGTGTCAAAGCTCAACAAGGACTTACCTGGATTTCAAATGGTAGATGCAAATGTATATGATATCTTTCTGCAGATCGTTACAGATCCTTCTGGTTTTG 862 0.4304 MGKGYAPWLLFINEVLLLVHFSACKVPAIIVFGDSSVDSGNNNFIPTMARSNFQPYGRDFFNGKPTGRFSNGRIPPDFVSEAFGIKQAVPAYLDPAFSISDFATGVCFASAGTGYDNATSNVADVIPLWKEVEYYKEYQKKLRAHLGEEKANEILSDALYLVSIGTNDFLENYYALTERRSEFPLVQQYEDFLLGLAKNFFTEIYGLGARKVSLTGLPPMGCLPLERAMNILEFHNCVEEYNNLALEFNGKLGWLVSKLNKDLPGFQMVDANVYDIFLQIVTDPSGF 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0238 287 CDD SGNH_plant_lipase_like 27 287 IPR035669 -
Pvu6g0238 287 Pfam GDSL-like Lipase/Acylhydrolase 29 277 IPR001087 GO:0016788
Pvu6g0238 287 Gene3D SGNH hydrolase 19 287 IPR036514 -
Pvu6g0238 287 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 3 287 - -
Pvu6g0238 287 PANTHER GDSL ESTERASE/LIPASE EXL3 3 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0238 Pvu-Chr6 10493252 10495091 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0238 27 283 Pollen Coat Proteome AT1G75910 37.452 2.49e-51 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0238 - - pvu:PHAVU_006G0230001 578.941