Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0226 ATGGGGATTCAGACAATGGGATCTCAAGGTAATGGGCAACAGTCTCATTTACAGCCTTCATCTTTGTCTAGGCAAGGTTCATGGTATAATCTTACTCTTGATGAGGTTAATAGTCAATTAGGAGACTTAGGGAAGCCATTGGGGAGCATGAACCTTGATGAGCTTCTTCAAAATGTGTGGACTGCTGAAGCAAGTAAGTCTTCGGTGATAGGCGTGGATAGTGAGAACATGTCGTCCTCTTCCTCGCTTCAGCGGCAGGCCAGCCTGACGTTGGCTCGTGCGTTGAGTGGGAAGACTGTGGATGAGGTGTGGAGGGAAATTCAGCAAGGTCAGAAGAAAAGGTATGGAGATGAAGTGAAGACTGAGGAGGGAGAAATGACTTTTGGTGAGACCACCTTGGAAGATTTCTTGGTGCAAGCAGGGCTTTTTGCTGAAGCTTCAATCAGTCCAGCTGTCGGATTGGATACAATGGATTTCTCCACTGCTCAAGGTTTCCAGCACAAAACGGGCTTGTCATCCTCCCCTTCTATTGGCAGTTTATCAGACACGAGACCGGGCCGGAAAAGGGATACTCCTGATGCATTTGAGAAAACCCTGGAGAGGAGGTTGAGGAGGAAAATCAAGAATAGGGAATCTGCTGCTCGGTCACGAGCTCGGAAACAGGCATACCATAATGAACTGGTTGGCAAGGTTTCTCGTCTAGAAGAAGAAAATGTAAAGCTAAAGAAAGAGAAGGAATTCGAAGAAAGGTTAACTCCCGATCCATTGCCTGAACCAAAATATCAACTTCGAAGACATAACTCTGCCCCTTTCTGA 816 0.4657 MGIQTMGSQGNGQQSHLQPSSLSRQGSWYNLTLDEVNSQLGDLGKPLGSMNLDELLQNVWTAEASKSSVIGVDSENMSSSSSLQRQASLTLARALSGKTVDEVWREIQQGQKKRYGDEVKTEEGEMTFGETTLEDFLVQAGLFAEASISPAVGLDTMDFSTAQGFQHKTGLSSSPSIGSLSDTRPGRKRDTPDAFEKTLERRLRRKIKNRESAARSRARKQAYHNELVGKVSRLEEENVKLKKEKEFEERLTPDPLPEPKYQLRRHNSAPF* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0226 271 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 204 219 IPR004827 GO:0003700|GO:0006355
Pvu6g0226 271 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 199 244 IPR004827 GO:0003700|GO:0006355
Pvu6g0226 271 MobiDBLite consensus disorder prediction 166 181 - -
Pvu6g0226 271 MobiDBLite consensus disorder prediction 238 271 - -
Pvu6g0226 271 MobiDBLite consensus disorder prediction 207 226 - -
Pvu6g0226 271 SMART brlzneu 197 269 IPR004827 GO:0003700|GO:0006355
Pvu6g0226 271 CDD bZIP_plant_BZIP46 201 238 - -
Pvu6g0226 271 Gene3D - 199 251 - -
Pvu6g0226 271 PANTHER BZIP TRANSCRIPTION FACTOR 35 268 - -
Pvu6g0226 271 MobiDBLite consensus disorder prediction 166 194 - -
Pvu6g0226 271 SUPERFAMILY Leucine zipper domain 201 248 IPR046347 GO:0003700|GO:0006355
Pvu6g0226 271 MobiDBLite consensus disorder prediction 238 261 - -
Pvu6g0226 271 MobiDBLite consensus disorder prediction 1 21 - -
Pvu6g0226 271 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 35 268 IPR043452 GO:0003700|GO:0045893
Pvu6g0226 271 Coils Coil 224 251 - -
Pvu6g0226 271 Pfam bZIP transcription factor 201 245 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0226 Pvu-Chr6 10227112 10233980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0226 21 271 bZIP Transcription Factor Family AT3G56850 46.154 9.42e-65 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu6g0226 bZIP_1 3.4e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0226 K14432 - gmx:100798549 454.521