Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0224 ATGAATTTGAGATATGGTAGTGTGGTCTTTGTTGCATTAGTGGTTTTGCCACTCATGGCTTCTTCAGCTTCAGTTGTGAAGAACCTTCCTGGTTATGAGGGTGACCTTCCTTTCAAGCTTGAAACTGGATACATAGAAGTGGGAGAGGAAGAAGTGAACATATTTCACTTATTTGTTGAGTCTCAAAGAAACCCCTTCATTGATCCACTGTTACTATGGTTCGTTGGTGGTCCAGGTTGTTCTGCACTATCAGCGTTCTTTTTTGAAAATGGGCCTTTAATAATGAATGGTGATTTGGGAGGAAACCTTCCAAAACTTGAGTTGAACCCATATGGGTGGTCACAGACATTGAATATGTTATACATAGATATGCCAGTGGGCACAGGATTTTCATACTCAGAAACGCAAGAAGGCTATTACAGTGATGACAAGTTATGGGTGGAGCATACTTATCAATTTTTACAAAAGTGGTTTATTGATCATCCAAAGTTTAACTCAAATCCATTTTACATTGGTGGTGGATCATATTCAGGATTGATTACAGGACCTCTTGTTCAAAAGGTATATGAAGGTTATAAAGCAAGACAGAAGCCACTGATAAACATCAAAGGTTACGTACTTGCGAGCCCAGCTGTTGATTGGCATACAGAACTGAATATGAAAGTTCTGTATGCATACCAGAGGAGTCTTATATCCCCAGCACTCTATAAGTCTATGAAAGAAAACTGTAACGGTGATTATGTAAACATTGATCCAGAAAACACAAAGTGCGTCTCAAATTATGAAGCTTATTCTGAGCTAGTTCGTTACATAAACGAACAACAAATTATGGAACCTCTCTGTGTTACTACGCCTGGTTTGAATCGAGAAATCTTAGAAGAACTTGAAGATCCTCCAACATTTTGGTGTAGAAGCTATTATCATATCTTTGTTGACAAATGGGCAAATGATGAAAGTGTGAGGAAGGCCCTTCATGTAAGAGAGGGAACTAAAGAGGAATTCCTGAGATGCAACAGAACAGTGGCATACACCCTAACATGGCTAAACGTAGTACAATATTATCGGAATCTCACTAAAGCCAACCTTCAAGCTCTCGTTTACTGTAGTGATCTTGATATGAGTGTTCCACATATGGGTACACAACATTGGATCAATTCCTTCAACATGACCATACTTGACAAATGGCGAGCATGGTTTGTCGACGGTCAAGTTGCCGGGTTCACAGAAATCTATAAAATGAAAGAAGATCACTTCTTTACATATGCAATCGTGAAGGGTGCTGGACATGTGGCTCAAACATTTAAACCCAAGGAAGTTTATCATTTGATCAATAGATGGTTTTCATTTTCTCTTATCTAA 1359 0.3878 MNLRYGSVVFVALVVLPLMASSASVVKNLPGYEGDLPFKLETGYIEVGEEEVNIFHLFVESQRNPFIDPLLLWFVGGPGCSALSAFFFENGPLIMNGDLGGNLPKLELNPYGWSQTLNMLYIDMPVGTGFSYSETQEGYYSDDKLWVEHTYQFLQKWFIDHPKFNSNPFYIGGGSYSGLITGPLVQKVYEGYKARQKPLINIKGYVLASPAVDWHTELNMKVLYAYQRSLISPALYKSMKENCNGDYVNIDPENTKCVSNYEAYSELVRYINEQQIMEPLCVTTPGLNREILEELEDPPTFWCRSYYHIFVDKWANDESVRKALHVREGTKEEFLRCNRTVAYTLTWLNVVQYYRNLTKANLQALVYCSDLDMSVPHMGTQHWINSFNMTILDKWRAWFVDGQVAGFTEIYKMKEDHFFTYAIVKGAGHVAQTFKPKEVYHLINRWFSFSLI* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0224 452 Gene3D alpha/beta hydrolase 19 289 IPR029058 -
Pvu6g0224 452 SUPERFAMILY alpha/beta-Hydrolases 26 448 IPR029058 -
Pvu6g0224 452 Gene3D - 303 450 - -
Pvu6g0224 452 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 8 449 IPR001563 GO:0004185|GO:0006508
Pvu6g0224 452 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 10-RELATED 8 449 - -
Pvu6g0224 452 Pfam Serine carboxypeptidase 30 448 IPR001563 GO:0004185|GO:0006508
Pvu6g0224 452 PRINTS Carboxypeptidase C serine protease (S10) family signature 109 121 IPR001563 GO:0004185|GO:0006508
Pvu6g0224 452 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 132 IPR001563 GO:0004185|GO:0006508
Pvu6g0224 452 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 182 IPR001563 GO:0004185|GO:0006508
Pvu6g0224 452 PRINTS Carboxypeptidase C serine protease (S10) family signature 419 432 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0224 Pvu-Chr6 10134292 10149996 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0224 290 448 Calmodulin-binding Proteins AT2G22960 37.107 1.24e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0224 K16296 - gmx:100798023 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0224 6 10134292 10149996 Pvu6g0224 6 10134292 10149996 ECH