Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0216 ATGAATGGGCAGAAAATTAAGCGTCGAGTGGGTAAATATGAGGTAGGGAGGACCATTGGGGAGGGAACATTTGCAAAGGTGAAATTTGCTAGGAACTCTGAGACTGGGGAGCCAGTGGCTCTTAAGATTCTTGACAAGGAGAAGGTTCTCAAGTATATGCTGGCTGAGCAGATCCAGAGAGAAATAGCCACAATGAAGTTGATCAAGCATCCAAATGTTGTTCAACTACATGAGGTCATGGGGAGCAAGACAAAAATATACATTATTTTAGAGTTTGTGACTGGGGGAGAGCTTTTTCATAAAATTTTAAACACTGGACGGATGAGAGAAAAGGAAGCACGAAGACATTTCCAACAGCTTATAAATGCTGTTGACTATTGCCATAGCAGGGGTGTCTACCACAGAGACCTGAAACTAGAGAACTTACTATTAGATGCTTCTGGGAACCTTAAAATTTCTGATTTTGGATTGAGTGCACTTTCCCAACAAGTCAGGGATGATGGACTGCTCCATACAACATGTGGAACTCCAAATTATGTTGCTCCTGAGGTCCTTAATGATGGAGGCTATGATGGGGCAGCTGCAGATTTGTGGTCATGTGGTGTGATTCTCTTTGTATTGCTTGCAGGTTACTTGCCTTTTGATGACACTAATCTTTTGAACCTGTATAAAAAAATTTCAGCTGCTGAATTCACCTGGCCCCCTTGGCTTTCTTTTAGTGCCAGGAAATTGATAACTAGAATCTTGAATCCCAACCCCATTACTCGTATCACTGTACAGGAGATTTTGTGTGATGAATGGTTTAAAAAAGACTATAAACTTCCGGTTTTCAAGGAGACAAAGGAGAGCAACACTGATGACATTGAGGCCATCTTTAAAGACTATGAAGTGCACAATGTAAGAGAGAAGGAAGATCAGCCAACAGCTATGAATGCATTTGAATTGATATCCTTGTCCAAAGGGCTGAACCTAGAAAACTTGTTTGACATAGACCAGGGATTTAAAAGAGAAATAAGGTTCACATCAAAATGCCCTGCCAATGAAATTATCAACAAGATTGAAGAAGCTGCAAAACCTCTTGGTTTTGATGTGCAGAAGAAAAATTTCAAGATGAAGCTTAAAAATGTGAAAGCTGGAAGGAAGGGAAACCTCAATGTTGCAACAGAGATATTTCAAGTGGCACCTTCACTTCACGTGGTTAAGATTAATAAAGCAAAAGGTGATACATTAGAGTTCCTCAAGTTCTACAACAAGCTTTCAACATGCTTGGAGGATGTTGTTTGGAAAACTGAAGATGACATGGAAAATGCAAAGGGAAATTGA 1323 0.4006 MNGQKIKRRVGKYEVGRTIGEGTFAKVKFARNSETGEPVALKILDKEKVLKYMLAEQIQREIATMKLIKHPNVVQLHEVMGSKTKIYIILEFVTGGELFHKILNTGRMREKEARRHFQQLINAVDYCHSRGVYHRDLKLENLLLDASGNLKISDFGLSALSQQVRDDGLLHTTCGTPNYVAPEVLNDGGYDGAAADLWSCGVILFVLLAGYLPFDDTNLLNLYKKISAAEFTWPPWLSFSARKLITRILNPNPITRITVQEILCDEWFKKDYKLPVFKETKESNTDDIEAIFKDYEVHNVREKEDQPTAMNAFELISLSKGLNLENLFDIDQGFKREIRFTSKCPANEIINKIEEAAKPLGFDVQKKNFKMKLKNVKAGRKGNLNVATEIFQVAPSLHVVKINKAKGDTLEFLKFYNKLSTCLEDVVWKTEDDMENAKGN* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0216 440 SMART serkin_6 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0216 440 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Pvu6g0216 440 SUPERFAMILY Protein kinase-like (PK-like) 9 281 IPR011009 -
Pvu6g0216 440 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Pvu6g0216 440 Pfam NAF domain 307 366 IPR004041 GO:0007165
Pvu6g0216 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Pvu6g0216 440 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 4 431 - -
Pvu6g0216 440 Gene3D Kinase associated domain 1, KA1 304 429 - -
Pvu6g0216 440 Gene3D Transferase(Phosphotransferase) domain 1 93 275 - -
Pvu6g0216 440 CDD CIPK_C 311 420 - -
Pvu6g0216 440 PANTHER - 4 431 - -
Pvu6g0216 440 ProSiteProfiles Protein kinase domain profile. 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0216 440 Pfam Protein kinase domain 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0216 440 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0216 Pvu-Chr6 9864863 9871463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0216 4 390 CBL-interacting serine-threonine protein kinases AT2G26980 80.670 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pvu6g0216 Pkinase 5.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0216 - - qsu:112026068 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0216 6 9864863 9871463 Pvu8g2129 8 51661624 51668812 PCT