Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0214 ATGGGAAATACTTGTGCGAAAGGAAAACCTATTGCTCATGTATCTTCCTCCAATTTGTCTGGAAGTAAGAGGCCTGTAAGTAAGCCAAGGCAGTATTCAAATTCTTCTGTACAAAATCAAGCTCCAAAAGCTTCAGAATCAAATATTACCGCATCCATCTCTAGTAGCCTCAAGTCCTTTAGCTTGAATGATCTAAAGGAGGCTACTAAGAACTTCAGGCGAGAAAATTTAATTGGAGAGGGAGGATTTGGGCGTGTCTTCAAAGGATGGATTGATGAGAACACATATGGTCCCACAAGACCAGGCACTGGAATTGTGGTGGCCATTAAAAATCTTAAGCCAGAAAGCTTCCAAGGCCACAAGGAATGGCTTGCAGAAGTCAGTTATCTTGGGCAGCTTCAGCATGAGAATTTGGTGAAACTTATTGGTTATTGTTTGGAAGGTAAAAACAGGCTTCTGGTTTATGAGTTCATGCAAAAAGGAAGTTTGGAGAATCATTTATTCAGAAAAGGTGTTCAACCAATGGCTTGGGTTATAAGGGTCAACATTGCAATTAGTGTAGCAAGAGGACTGACATTCTTACATTCCCTGGACCAAAATGTGATCTTTCGTGATTTAAAGGCTTCCAATATCCTACTTGATTCAGACTTCAATGCAAAGCTTTCAGATTTTGGTTTGGCAAGGGATGGTCCAACTGGAGATAATACTCATGTTTCAACTCGAGTTATAGGAACTCAAGGTTATGCTGCACCAGAGTATGTTGCTACAGGTCACCTGACTTCAAGGAGTGATGTATATAGTTTTGGTGTAGTCTTGTTAGAGTTGCTTACCGGTAGGCGTGCAGTGGAAGATGACAGACCTGGATTTTCAGAGGAAACCTTGGTGGATTGGGCAAAGCCATTCTTGATTGACAACAGAAGAGTTTTGAGAATAATGGACACAAGGTTGGGGGGTCAATACTCTAAGAAAGGAGCACAAGCTGCAGCTGCACTTGCACTGCAATGCCTCAACACTGACCCCAAATTTAGACCCCCTATGGTGGAAGTTCTAGCAGCATTGGAAGGACTTAATTCCTCAAACTCATTCACAAGGACACCACCAACACCTGAGAGCCATGCAACCAAAAATTCTGATGGCCATTCACAAAAGTTAATCAGAAAAAGTATAGATGAATGCAACCAAAAATTCTGA 1191 0.4165 MGNTCAKGKPIAHVSSSNLSGSKRPVSKPRQYSNSSVQNQAPKASESNITASISSSLKSFSLNDLKEATKNFRRENLIGEGGFGRVFKGWIDENTYGPTRPGTGIVVAIKNLKPESFQGHKEWLAEVSYLGQLQHENLVKLIGYCLEGKNRLLVYEFMQKGSLENHLFRKGVQPMAWVIRVNIAISVARGLTFLHSLDQNVIFRDLKASNILLDSDFNAKLSDFGLARDGPTGDNTHVSTRVIGTQGYAAPEYVATGHLTSRSDVYSFGVVLLELLTGRRAVEDDRPGFSEETLVDWAKPFLIDNRRVLRIMDTRLGGQYSKKGAQAAAALALQCLNTDPKFRPPMVEVLAALEGLNSSNSFTRTPPTPESHATKNSDGHSQKLIRKSIDECNQKF* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0214 396 MobiDBLite consensus disorder prediction 358 375 - -
Pvu6g0214 396 SUPERFAMILY Protein kinase-like (PK-like) 47 361 IPR011009 -
Pvu6g0214 396 PANTHER TYROSINE KINASE FAMILY PROTEIN 19 381 - -
Pvu6g0214 396 Pfam Protein tyrosine and serine/threonine kinase 75 352 IPR001245 GO:0004672|GO:0006468
Pvu6g0214 396 CDD STKc_IRAK 78 356 - -
Pvu6g0214 396 Gene3D Phosphorylase Kinase; domain 1 46 157 - -
Pvu6g0214 396 ProSiteProfiles Protein kinase domain profile. 72 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0214 396 MobiDBLite consensus disorder prediction 1 48 - -
Pvu6g0214 396 Gene3D Transferase(Phosphotransferase) domain 1 158 377 - -
Pvu6g0214 396 MobiDBLite consensus disorder prediction 10 48 - -
Pvu6g0214 396 MobiDBLite consensus disorder prediction 358 382 - -
Pvu6g0214 396 ProSitePatterns Protein kinases ATP-binding region signature. 78 110 IPR017441 GO:0005524
Pvu6g0214 396 SMART serkin_6 72 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0214 396 PANTHER OS01G0588500 PROTEIN-RELATED 19 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0214 Pvu-Chr6 9829717 9832983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0214 29 359 Glycoside Hydrolase AT3G07070 47.904 9.39e-100 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pvu6g0214 PK_Tyr_Ser-Thr 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0214 - - gmx:100800654 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0214 6 9829717 9832983 Pvu8g2128 8 51634071 51637739 PCT