Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0207 ATGAAGAGATCCGTTTTGGGTTCTTTCAAAGCTGAACTTGAATCAGTCGCGGATGAGGAAAACCCTTCCCCAAAACTCAGTACGTGTGATATCTGCTTCAGGAGTTTCAGCTGCGGCAAGGCCTTAGGTGGGCACAGAAGATCCCACTTTATGAAGCAGCAGCAGCAAAAGAAGGTAAAGACCCGTTTAACTGATAATCACTCGTCAAAACCTGGTGATAGTAACATTAGGGTTATCTGTGATTTTGATGATGATGACGGCAAACACATTTGCTGTATTTGCAAGAAGGAATTTCCTACTAAGAATGCTTTGTTTGGGCACATGAGATCTCATCCTGAGAGACCATGGAGGGGTGTGTCCCCTCCTACTCAAAAGAACTCATCTTCTCCTTCTTCTTCTTCTTACTACTATTCTTCTTCTTCTTCTTCCCTCAATTCTGATTCCATCGAGAAAAACAAGGAGGATCACGATGTTGACGATGGCTGTGATGGGGGTGACGGCGTGATCGCATCTCATGAACATCACACGAATCTCGTTGATCTTTTAAGGCTTACTTCACCCAGCTGGCTCAGGAAAGATACAAGAGGCAGAAATTCTATTGGTGGGTACCAGGCTGCTGAAACTCTTTTTTACATGAGTTCTTATTCCAAGTACTTTTGCGGTGAGCCTAATAGGGTTTCCCCCAACAAGGAACAAGTGCAGCCAAAGAGTGCCCCAGCCCTAATCAAGCAGCGCAAAAGAAAGATTTGTCAATCCTCGTCAAGTAAGAAAGATATGGTGAAGAAGATAAAGTTTTTATTTAAAGGTGAATTGAACTTGGGAAACACATCCAATGGGGTTGGTGGATGTGATGGTGAGGCTAATGAACTTAACAGGTCGAAGGGTTTATCTGAATCTGGGGTTGAGTATAACCATGAGGATGAGAAGAAGGGTATGGGTGAGAGTTTTGATGATTTGAATGCTGAAATGGTTACTCCAACTAATAAGGTGCAAGAGCATGTTGGTCCTTCTGAGGTGAAGAAGAATATGGATAAGAAAGGGAAAAACAGTAAGAAGACGGTGCTGAATTCAAGGACAAAGGACTCGGAATCTGAGAAAGCGAGTCAAGAGAAAACAGATTGGTATAAATGTTCTGCATGTGGAAAAAGCTTCAAGACTTTCCAAGGCCTAGGAGGGCACAGGTCAGTCCACAAAGAGAAGAACACTGTAAGCATTGATGAGCCAAACCCCTTGGAAGCTGTTGCTGAACAAAACAACTCTAGCAGCTCCTGCAACTTGAGCAAGATGGAGGACCCATTATTTAATGAACCAACCATACCAGATCAGCCATGCCAATCTTCAGGTGTCAAGCAACTCAATTTCGATCTCAATGAGCTACCTTGTTCTATGGACGAGGAGGACTAG 1404 0.4352 MKRSVLGSFKAELESVADEENPSPKLSTCDICFRSFSCGKALGGHRRSHFMKQQQQKKVKTRLTDNHSSKPGDSNIRVICDFDDDDGKHICCICKKEFPTKNALFGHMRSHPERPWRGVSPPTQKNSSSPSSSSYYYSSSSSSLNSDSIEKNKEDHDVDDGCDGGDGVIASHEHHTNLVDLLRLTSPSWLRKDTRGRNSIGGYQAAETLFYMSSYSKYFCGEPNRVSPNKEQVQPKSAPALIKQRKRKICQSSSSKKDMVKKIKFLFKGELNLGNTSNGVGGCDGEANELNRSKGLSESGVEYNHEDEKKGMGESFDDLNAEMVTPTNKVQEHVGPSEVKKNMDKKGKNSKKTVLNSRTKDSESEKASQEKTDWYKCSACGKSFKTFQGLGGHRSVHKEKNTVSIDEPNPLEAVAEQNNSSSSCNLSKMEDPLFNEPTIPDQPCQSSGVKQLNFDLNELPCSMDEED* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0207 467 MobiDBLite consensus disorder prediction 291 313 - -
Pvu6g0207 467 MobiDBLite consensus disorder prediction 47 70 - -
Pvu6g0207 467 MobiDBLite consensus disorder prediction 148 169 - -
Pvu6g0207 467 ProSitePatterns Zinc finger C2H2 type domain signature. 377 397 IPR013087 -
Pvu6g0207 467 MobiDBLite consensus disorder prediction 334 368 - -
Pvu6g0207 467 MobiDBLite consensus disorder prediction 299 313 - -
Pvu6g0207 467 Pfam C2H2-type zinc finger 375 399 - -
Pvu6g0207 467 Pfam C2H2-type zinc finger 89 113 - -
Pvu6g0207 467 Pfam C2H2-type zinc finger 29 49 - -
Pvu6g0207 467 PANTHER ZINC FINGER PROTEIN ZAT4-LIKE 2 434 - -
Pvu6g0207 467 ProSiteProfiles Zinc finger C2H2 type domain profile. 27 54 IPR013087 -
Pvu6g0207 467 MobiDBLite consensus disorder prediction 105 169 - -
Pvu6g0207 467 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 2 434 IPR044653 GO:0003700
Pvu6g0207 467 MobiDBLite consensus disorder prediction 120 147 - -
Pvu6g0207 467 MobiDBLite consensus disorder prediction 416 449 - -
Pvu6g0207 467 ProSiteProfiles Zinc finger C2H2 type domain profile. 375 402 IPR013087 -
Pvu6g0207 467 Gene3D Classic Zinc Finger 27 111 - -
Pvu6g0207 467 ProSitePatterns Zinc finger C2H2 type domain signature. 91 111 IPR013087 -
Pvu6g0207 467 SMART c2h2final6 375 397 IPR013087 -
Pvu6g0207 467 SMART c2h2final6 27 49 IPR013087 -
Pvu6g0207 467 SMART c2h2final6 89 111 IPR013087 -
Pvu6g0207 467 ProSitePatterns Zinc finger C2H2 type domain signature. 29 49 IPR013087 -
Pvu6g0207 467 ProSiteProfiles Zinc finger C2H2 type domain profile. 89 111 IPR013087 -
Pvu6g0207 467 MobiDBLite consensus disorder prediction 326 368 - -
Pvu6g0207 467 SUPERFAMILY beta-beta-alpha zinc fingers 89 397 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0207 29 122 C2H2 Transcription Factor Family AT2G26940 38.235 1.26e-13 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pvu6g0207 zf-C2H2_6 1.5e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0207 - - gmx:102664324 464.922