Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0206 ATGGATCAAGAACTGACTCAGATTGCCAAACAATATGAATCAAATAAGGTTGGATTGAAGATAAAGCTGTTTACAGGATCTCCACTAAAAGAAGTGGCTTTAGAAGTAGCCATAGACCTACAGGCAACTTGGGTGATACTTGACAGGAAAATGAAGAAAGATGGGGAGTTTTTCCAGCAGAGGCTTTCTTGTGGTATATCTATATTAAAGAGTAATGATCGGATTCTTCGACTAAGAGGGCCTTTAAATCTTCCAGATGAAATACCATGTAACAGCCATGAGGCATATGATGAAAGTGTACCAAGTGTTCCATATCAACATCTTTTCGACATTGATGCTTTCCCCAAGAGAAAACTTGAAGATGGTGAACAGAACCAGATGCAAATTAGGCCCTATGAGGGTTCCTCGAATGACAAAACCAATATTAATGAAAAAATATATCCGACAAGTCCTAATCACCTGAGAATGGATGGAACAGAAGAAATAAATAGCATGCAAATGACAGATAAAATAGAAAGAGCTGAGCAAGGTCACGATCAAAAACAGATCCAAAGCATGCCCCTTGAGATTGAGGGGGACACAACAATTATGATAAAAACTGATCAAGCAACTGCTCAGGAAATAGCTGATCAACCGAGAAAACATGAAGAAAAGGCAAACAACTTCATCCCTGGTGAGAATTGGAACTTGAGCAATCCAACAAAGAGTGAAGAAATGATTGATCAACCAAAAGATGATCCGCTGAGTCAGAATCATGCACAGACACTGAGCATTTTCAGTGGTGCTATATTGGATGATGGAGAGCAAGAGAAAAGTATTTTAGAAAATTCAATGTACATTTTCTGCTCTCTCTGCAAAACTAGACGACCTAATATTGGGTGCCAAAAGGAATTTAGTTATGAAGAACTCCTAGCAGCCACAGATGCCTTTTCATTGAAGAACTGTCTCTCCCAAAGCGGATCTCTATTCACTTTCAAAGGCCAGGTGGAGGGAGGGATGACAGTAGTGGTTAAGCAGCATGAAGTAACCAACACTCAAGTAAGGGAGAAAGTGAAGTCAGAAATCCAAACCATCCTCAAAGCTACACATAAGAATGTGATTACTCTATTGGGCTCATCTACAACAGAATCTTTCCTGTTTACTGTATATGAGTATGCTTGCAATGGTTCACTTGACAAGTATCTATCAAAAGAAAGCTCCAGATCATTGACCTGGAAAGAAAGGGAAAGAGTGGCAATAGGCCTTGCCAGAGGCCTTAAGTACCTACATGACAATAACATTGTTCATTGCAATATAAAACCAAGCAATATTCTTCTAACCCATGACTTCAATTCACTGATTGGAGATTTCAACTTTGGGAAAGAACACGGATTGAAGTCCTACAAAACTAAAAACAAAGAGAATTATGAATACCTAGCACCAGAATACCGGGAGAAAGGGAAATCATCATCAAAGACAGATGTATACTCATTTGGTGTGGTTATTTTAGAGTTGATCTCTGGGCGAAGGACTACGGATTTCACGTCAGAAGATAAAAGCCTTGTTGAATGGGCAAAGCCTTTACTTAAAAAGAAGAATTACTCAGAACTGGTGGATGCCATAATCAGAAACTCCTACGAAGAGGATCACCTTCGTTGGATGGTCAAAGTAATAACAGAATGTTTGGAAAAGAATCCTAAGAAAAGGTTATCAATGAATGTGGTTGTTTCTGAATTACAAGGCCTAGCAGACAGTGAACTCTACCACATGACAGAAGATATTACTTCAGCTATATCAGATTCGAGAAGTGTGTCAGAAACAAATGGTTCTCAAGGTCCAACAATAAATAAAGCTGATCAGCCAAACCAGGAAGTCGAGCAAAGTGAGAGCATACTCTCTGGGGAGAAAAACAAGTTAAGACTAACAGTTGAGAATAATCTCTTTTACATAGCAAACCAGGGAAACTCTGATAAACTGAGACATAATGAAGAACAGAAGCAAAGCAGGTCCCGGGGGGAGGAGTGGAGCTCAGGAAAGATAATAACAAATGACCACAGAATGGACGAGACAGAAGTTGATCAGCTGAATAAGTTTGAAGAACCGATTCTAAGCCCACCCCATATGGAGGGCATCACAACACAAAACATTAGTGTTGAGAACTTGCAGGATGGATGTCAAGGTGAAATAATTTTGGAGAATTCGAAGTCCTCTGCATGCTCTATTTGCAGAAGTAGAAGACCAAACAATACAGGGTCAAAAGATTTTACTTATGATGAACTTGTAGAAGCCACAGAAGGATTTTCCACTCAGAACTCCCTATCTGAAAATGAAGATGGACCTACTTTCCAAGGCCTGCTAGAGACACGGGTAAAAGTAGTTGTTAAAAAATATCAAGTTAATACCTCCCAAGAACAGAAGATAATAAAATCAGAAGCAAAGCTGCTCATCAGTGCTAGTCATAAAAATGTGGTCATGCTCTTGGGTTTATGTACAAATAAAAGCCAACTCATGGTTGTGTTTGAGAAAGTATGCAACGGTTCACTTGACCAGTACCTAACAAGGGGAAGTTTCCAGTTATTGACTTGGAAGCAAAGGCTGAAAGTAATAATGGGTACTGCCAGAGGTTTAAAGTACCTACATGGGAAAGACATAATCCATGGAAATATAAAACCAAGTAATATTCTTCTGACACACGAGTTTGAACCACTGATTGGAGATTTCCACTTCGGACAAGAGAAAGTTGGACCAAAGAAATCCAGCAAAGATAAAAGTGTAAGAAATTCTGGATATGCAGCACCTGAGTATCTGGAGAATGGAAAACTATCAAATAAGACAGATGTATACTCCTTTGGAGTGGTTCTTTTGGAGCTCATCAGTGGCCGGAGGGCTGCGGACAAATTACCAGATGGAAAAAGCCTTGTTAACTGGGCCAGGCCCCTACTGACAGGAAAGAAGTACCCACAGTTGTTGGATGCGAAAATGAGTAACTCCTGTGAAGAAGAAAAACTTGTATGGTTGGTCCAAGTTACAGAACAGTGTCTCAGAAAGAATCCTAAGGATAGATTTTCAATGAATGTGGTTCTATCTACCTTGCAAGGCATTGGAGAATCAGAAGAGTGTTGTGTAATTGAAGATTCTTCTCTAGAAAAGTCATATCTAAATGGTCTTGCGATGAGTAGTACACAAGATCTAATGAAGGCTGATCAAGTGAAGAAACAGGAACAAGAACTGATTGACAGAAACCAATACAAGCAGGAAAACAGTCCAATATTGACAGCCAAAACCAATCACATGGAAGGTCATAGAAATGAAGATCAGATGATACAGGGTGGAGAAGATGTGCAGAGGAATCCCTATATGTTCGGGGTAAGTGCTATCAGCAATGACATGATTGATCAGTTAAACCCTGACCAACAATTCCAGGAAAAACTGCACGTTAAGGGAAGCTTTGACATAGAAGATATGAGTAAAAAAGTAGATAAAGAACAAGAGGTGAGCAAGGATGAAAAACAAATACAGGGAAGCTGTGATGATAGTTTATTGAATGGGAATGAAGGCAAAATCATTTTGGAAAGTTCAAATTCTTCTGCTTGCTCAATCTGCAAAAGTAGGCGGCCAAACAGTGAATTGCAAAGGAAATATACTTATGAAGAGCTTCAAGCTTCTACAGAAGGATTTTCAGTAAAGTACTCCCTACGTGAAGGTGAATATGGACCTGCTTTCAGAGGCCAGCTAGAGAATAACCAGGAAATAGTTATTAAGCAACATGCATTCACAAGCTTACAGGAGCAGAAGGTGTTCATGTCAGAATTCGAATTGCTTATAAATGCCAGACATGAAAACGTGATCATGCTGTTGGGTTCATGCATACGATTAAGTCAACTGCTAATTGTGTATGAGAAGGCATGCAACGGTTCACTTGACCGGTACTTATCAAGAGAAAATGGAAGAACACTGACTTGGGGAGAAAGGGTGAAAGTTGCAATAGGTGTTGCCAGTGGTCTAAACTATCTACATGAGAATAATATAGCACATGGAGGAATAAAACCAAGTAACATTCTTCTAAATCATGAGTTGAAACCACTGGTAGGAGACTTTGTTTTTGGAAAAGAAAGATGTGAATCGAAAAATCTATGCAGACTTAAAAGTATGAGGAATTGTGGACGCACTGCACCAGAGTGTCAGGAGAGTGGAAAACTATCGACTAAGGCAGATGTATACGCTTTTGGTATAGTTCTTGTGGAGTTGATCACTGGCCGTATGCTTACAGAAAAAATATCAGGACAGAGATGCCCTACTGAATGTATAAGGTCACTTCTTGAAGGACGAAAGTTTCTACAGTTGGTGGATCCCAAAGTCAGCAGCTCCTATAATGAACAAGAACTAGTTTCATTGGTCCACGTAATAGAAAATTGTCTGAGAAAGAATCCAAAAGAAAGATTCACAATGAATACGGTTGTCTCTGCACTGCAATCTGTGGTAGATTGCAGTAACATATATGTAAAGGAGGAGTTTTCATCAGAAAACTCGAATGTTTCAGAAGTAACACAGACAAAAGTGGAGGAGGAACCACCAAATGAAGAATGCTTAGACATGGAGATCAGTGAAGAAAGAGAGCACAACACAAGTTGTAGTGGAGGCAATGGAACAGAAATATGTCAAGGGTGTGACAGCAACCCAACTTCTTTTGAAAATAGAAAGAAAACAGAAGAAAAAGAAAGCTTAAGCACCAAGGTATATTGGGAAGGGTGCTTATCTTATGGTGGAGCTAAAGAATTTTATCTTGAAGGGATCAAAGAGTACACAGCATGTGAAGAATTTTTCGGCTTTTGTGATTTAATTTGA 4824 0.3934 MDQELTQIAKQYESNKVGLKIKLFTGSPLKEVALEVAIDLQATWVILDRKMKKDGEFFQQRLSCGISILKSNDRILRLRGPLNLPDEIPCNSHEAYDESVPSVPYQHLFDIDAFPKRKLEDGEQNQMQIRPYEGSSNDKTNINEKIYPTSPNHLRMDGTEEINSMQMTDKIERAEQGHDQKQIQSMPLEIEGDTTIMIKTDQATAQEIADQPRKHEEKANNFIPGENWNLSNPTKSEEMIDQPKDDPLSQNHAQTLSIFSGAILDDGEQEKSILENSMYIFCSLCKTRRPNIGCQKEFSYEELLAATDAFSLKNCLSQSGSLFTFKGQVEGGMTVVVKQHEVTNTQVREKVKSEIQTILKATHKNVITLLGSSTTESFLFTVYEYACNGSLDKYLSKESSRSLTWKERERVAIGLARGLKYLHDNNIVHCNIKPSNILLTHDFNSLIGDFNFGKEHGLKSYKTKNKENYEYLAPEYREKGKSSSKTDVYSFGVVILELISGRRTTDFTSEDKSLVEWAKPLLKKKNYSELVDAIIRNSYEEDHLRWMVKVITECLEKNPKKRLSMNVVVSELQGLADSELYHMTEDITSAISDSRSVSETNGSQGPTINKADQPNQEVEQSESILSGEKNKLRLTVENNLFYIANQGNSDKLRHNEEQKQSRSRGEEWSSGKIITNDHRMDETEVDQLNKFEEPILSPPHMEGITTQNISVENLQDGCQGEIILENSKSSACSICRSRRPNNTGSKDFTYDELVEATEGFSTQNSLSENEDGPTFQGLLETRVKVVVKKYQVNTSQEQKIIKSEAKLLISASHKNVVMLLGLCTNKSQLMVVFEKVCNGSLDQYLTRGSFQLLTWKQRLKVIMGTARGLKYLHGKDIIHGNIKPSNILLTHEFEPLIGDFHFGQEKVGPKKSSKDKSVRNSGYAAPEYLENGKLSNKTDVYSFGVVLLELISGRRAADKLPDGKSLVNWARPLLTGKKYPQLLDAKMSNSCEEEKLVWLVQVTEQCLRKNPKDRFSMNVVLSTLQGIGESEECCVIEDSSLEKSYLNGLAMSSTQDLMKADQVKKQEQELIDRNQYKQENSPILTAKTNHMEGHRNEDQMIQGGEDVQRNPYMFGVSAISNDMIDQLNPDQQFQEKLHVKGSFDIEDMSKKVDKEQEVSKDEKQIQGSCDDSLLNGNEGKIILESSNSSACSICKSRRPNSELQRKYTYEELQASTEGFSVKYSLREGEYGPAFRGQLENNQEIVIKQHAFTSLQEQKVFMSEFELLINARHENVIMLLGSCIRLSQLLIVYEKACNGSLDRYLSRENGRTLTWGERVKVAIGVASGLNYLHENNIAHGGIKPSNILLNHELKPLVGDFVFGKERCESKNLCRLKSMRNCGRTAPECQESGKLSTKADVYAFGIVLVELITGRMLTEKISGQRCPTECIRSLLEGRKFLQLVDPKVSSSYNEQELVSLVHVIENCLRKNPKERFTMNTVVSALQSVVDCSNIYVKEEFSSENSNVSEVTQTKVEEEPPNEECLDMEISEEREHNTSCSGGNGTEICQGCDSNPTSFENRKKTEEKESLSTKVYWEGCLSYGGAKEFYLEGIKEYTACEEFFGFCDLI* 1608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0206 1607 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 2 120 - -
Pvu6g0206 1607 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 717 1117 - -
Pvu6g0206 1607 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 1174 1504 - -
Pvu6g0206 1607 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 239 593 - -
Pvu6g0206 1607 SUPERFAMILY Protein kinase-like (PK-like) 296 590 IPR011009 -
Pvu6g0206 1607 Gene3D Phosphorylase Kinase; domain 1 1183 1293 - -
Pvu6g0206 1607 ProSiteProfiles Protein kinase domain profile. 310 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0206 1607 Pfam Protein tyrosine and serine/threonine kinase 1222 1483 IPR001245 GO:0004672|GO:0006468
Pvu6g0206 1607 Pfam Protein tyrosine and serine/threonine kinase 772 1023 IPR001245 GO:0004672|GO:0006468
Pvu6g0206 1607 Pfam Protein tyrosine and serine/threonine kinase 330 572 IPR001245 GO:0004672|GO:0006468
Pvu6g0206 1607 MobiDBLite consensus disorder prediction 651 670 - -
Pvu6g0206 1607 PANTHER OS01G0253100 PROTEIN 2 120 IPR045271 GO:0004714|GO:0006468
Pvu6g0206 1607 PANTHER OS01G0253100 PROTEIN 239 593 IPR045271 GO:0004714|GO:0006468
Pvu6g0206 1607 PANTHER OS01G0253100 PROTEIN 1174 1504 IPR045271 GO:0004714|GO:0006468
Pvu6g0206 1607 PANTHER OS01G0253100 PROTEIN 717 1117 IPR045271 GO:0004714|GO:0006468
Pvu6g0206 1607 MobiDBLite consensus disorder prediction 223 248 - -
Pvu6g0206 1607 Gene3D Phosphorylase Kinase; domain 1 734 834 - -
Pvu6g0206 1607 Gene3D Phosphorylase Kinase; domain 1 284 385 - -
Pvu6g0206 1607 ProSiteProfiles Protein kinase domain profile. 760 1027 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0206 1607 Gene3D Transferase(Phosphotransferase) domain 1 836 1044 - -
Pvu6g0206 1607 Gene3D Transferase(Phosphotransferase) domain 1 387 597 - -
Pvu6g0206 1607 Gene3D Transferase(Phosphotransferase) domain 1 1296 1511 - -
Pvu6g0206 1607 SUPERFAMILY Protein kinase-like (PK-like) 743 1024 IPR011009 -
Pvu6g0206 1607 MobiDBLite consensus disorder prediction 130 148 - -
Pvu6g0206 1607 MobiDBLite consensus disorder prediction 591 626 - -
Pvu6g0206 1607 MobiDBLite consensus disorder prediction 130 156 - -
Pvu6g0206 1607 SUPERFAMILY Protein kinase-like (PK-like) 1202 1483 IPR011009 -
Pvu6g0206 1607 ProSiteProfiles Protein kinase domain profile. 1219 1487 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0206 Pvu-Chr6 9511477 9526265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0206 298 596 Trihelix Transcription Factor Family AT5G38560 36.538 1.43e-52 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pvu6g0206 PK_Tyr_Ser-Thr 1.8e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0206 - - vun:114188408 2383.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2121 8 51575922 51577925 Pvu6g0206 6 9511477 9526265 PCT