Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0200 ATGCTTGTCACGCAGCAGTGGAGGATGAGGTTATCAGATGATCATTCCCTAGCCAGAGGTCGGGGCAAGGGAACAGTTTCCCAGAACATGCATGGTGTGCAAGTGAAGCAGATCGTGATAGCGGCAGGCGAGACCACAGAGAAGTATGAATTTCAGCTTATCCAAGAGATCATTAAGGAGGCCTCTAGAAAGCTAAACCACACCATTTTGCACATTGCTGAATACCCAGTTGGAATAGAGACTCGCATATCAGAAGTGATGCCCCTTTTGCATATTGAACCAGGTGAAGATATTCGTGTCATTGGAATCCATGGACTTGGAGGCTTAGGTAAGACAACAATTGCAGGGGCGTTATATAACTTGATTGCAGACCAATTTGAAGCTACAAGTTTCCTTGCTGACACAAGAGAAAGTTCAAATCAAAGACAAGGCTTAGTGCAACTTCAAGAATCACTTCTTTTTTATACAGTTGAGGACAAGAACATCAAGTTGGGAAGCATTTACAAAGGAATCCCTATTATCAAGAAAAGGCTATGTTGCAAAAAACTTCAAGCACTAGCAGGAGGACGCGATTGGTTTGGTTTTGGAAGTGTGATAATTATAACAACAAGGGATAAACACTTGATGGCAGCTCATCAGGTTGACAAAACCTATGAAGTAAAGAAACTAAACCACGGTGAAGCTTTTGAACTGTTCACTTGGAGTGCCTTCAAAAGGAAGGCACCTGATGCAGGCTATTTGGAGATTTGTAACCGTGCGGTTCTCTATGCTGAGGGGCTTCCATTGGCTTTGAAAGTAATGGGGTCAAATTTGTTTGGTAAAACAGTGGCAGAGTGGAAATCGGCTCTGGGAAAATATGAAAAGATTCCCAGCAGAGAGGTTCAGAATGTACTAAGAGTAACCTATGATAATCTAGAAGAGAATGAGAAGGAAATTTTCCTTGATGTAGCACGCTTCTTCAAGGGGGAGACAATGGAGTATGTAGAGAAGACACTGCAAGCTTGTGGTTTTTATCCAACATTTGGCATCAGTGTACTTATTTATAGATCTCTTGTTAGTATTGATGAATATAACAGATTGAGAATTCATGATCTGATACAAGACATGGGTAGGGAAATCGTTAGAGAAGTTTCACCAATAGAGCTTGGGAAAAGAAGTAGATTGTGGCATCATGAAGATGTTTTTGAAGTACTTACTGAAAATACTGTAAGAGCCATAATTCAAAGCATGATGGTGAACCTCCCTGATGACTATATGGTACACTTGAAAGATGATTCCTTGAAGATGATGAAAGATCTTAAAATTCTTACAGTTCGAAATGGACACTTTTTTGGAAGCCCCCAACATCTTCCAAACAACTTAAGGTTGCTGGACTGGATGAAATATCCTTCATCTTTGCCATCTAGTTTTCAACCAAAGAAACTTGTTGTACTAAACTTGTCATCAGGAAGTCGTTTTACAATGCAAGAGCCATTCAAGTATTTGGATTCCTTGACTTCTATGGACTTGAGTTCTTGTGAATTGTTGACAAAACTACCAGAAATTTCAAGAGCCCCTAATTTGACAGAACTAAATCTGGACTATTGTACAAATTTAGAAGAAGTTAATGAATTTGTTGGATTCCTTGAGAAACTTGTTGAGTTTAGGGCTTATGGACGCACCAAGCTTAAGGTTTTTCCAAGTGCCATCAGGTTGACATCATTGAGAAGTCTTATCCTTAATTGGTGCTCAAGCCTTCAAAATTTCCCTGCTATTTTGGGGAAAATGGATAACCTCATGTCCCTTTCTATAGAAGGCACATGTATAAAAGAGTTGCCTTCTTCCATTGGAAACCTTTATGGTCTTCAAGAATTAAGCATGACATCTTGCTTAAGCCTCAAGGAACTGCCTCACAACTTTGATATGCTCCAAAGTCTTACAAACCTTGATATGGATGGTTGTCCACAACTTCGAAACTTTTTGACAAAGTTGACAAATATGGGAGAATCTACCCATACCTTTGATAACATTCAGTCACTGAATCTTGAAAACTGTGGCCTTATAGATGAAGATCTTCCCGTAATTTTCAATAGTTTCCCAAAATTAGCATCAATAGAAACTTTTGAGGGATGGGTATTACAGGTTATGGTGCCTGGAACAAGGGTTCCAGCATGGTTTGACCATGTCACAAAAGGAGAATATATGACATTTTGGGTGCGTGAAAAGTTTCCAGCTATTATCATATGCTTTGCTCTTGAGGTTGAGAGTGAGATGGAGAAGATTTTTAACCGTGAAATTCGATTTTATATAAATGGTGAGGAAGTTTATGAATTGGAAATTCCAAGAGGCTTTTCAGATATGGTGACAGATCATGTGTGGCTTTATGACTTGAGAACTCATTCATCCATCCACTGGCCTAGTCTTGATTCATATCAGATGGATGGCTGGAATCAGGTTGAGATTGCATGTGAGAAGATAAGTGGAGCATCAAATGTGACTGTGAGTTGGTGTGGAGTTCATGTGTTTAAGCAAGAAGCTAACATGAAGGACATACTACTTACAGATCCTGATGCAAATTCAGATTTAGAGAGTGAAAAAAAACACCAGCTGGGAACTGATCAGAACCAAGATAAGAATTTATTGAATGAAAAGACATTGAATGGTGTTACCAAAGATTCAATGTTATCATTAACTCATGAAGATATTGGTGGTGTCAAG 2697 0.3915 MLVTQQWRMRLSDDHSLARGRGKGTVSQNMHGVQVKQIVIAAGETTEKYEFQLIQEIIKEASRKLNHTILHIAEYPVGIETRISEVMPLLHIEPGEDIRVIGIHGLGGLGKTTIAGALYNLIADQFEATSFLADTRESSNQRQGLVQLQESLLFYTVEDKNIKLGSIYKGIPIIKKRLCCKKLQALAGGRDWFGFGSVIIITTRDKHLMAAHQVDKTYEVKKLNHGEAFELFTWSAFKRKAPDAGYLEICNRAVLYAEGLPLALKVMGSNLFGKTVAEWKSALGKYEKIPSREVQNVLRVTYDNLEENEKEIFLDVARFFKGETMEYVEKTLQACGFYPTFGISVLIYRSLVSIDEYNRLRIHDLIQDMGREIVREVSPIELGKRSRLWHHEDVFEVLTENTVRAIIQSMMVNLPDDYMVHLKDDSLKMMKDLKILTVRNGHFFGSPQHLPNNLRLLDWMKYPSSLPSSFQPKKLVVLNLSSGSRFTMQEPFKYLDSLTSMDLSSCELLTKLPEISRAPNLTELNLDYCTNLEEVNEFVGFLEKLVEFRAYGRTKLKVFPSAIRLTSLRSLILNWCSSLQNFPAILGKMDNLMSLSIEGTCIKELPSSIGNLYGLQELSMTSCLSLKELPHNFDMLQSLTNLDMDGCPQLRNFLTKLTNMGESTHTFDNIQSLNLENCGLIDEDLPVIFNSFPKLASIETFEGWVLQVMVPGTRVPAWFDHVTKGEYMTFWVREKFPAIIICFALEVESEMEKIFNREIRFYINGEEVYELEIPRGFSDMVTDHVWLYDLRTHSSIHWPSLDSYQMDGWNQVEIACEKISGASNVTVSWCGVHVFKQEANMKDILLTDPDANSDLESEKKHQLGTDQNQDKNLLNEKTLNGVTKDSMLSLTHEDIGGVK 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0200 899 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 717 882 - -
Pvu6g0200 899 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 47 689 - -
Pvu6g0200 899 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 315 IPR027417 -
Pvu6g0200 899 SUPERFAMILY L domain-like 409 697 - -
Pvu6g0200 899 Gene3D - 60 218 IPR027417 -
Pvu6g0200 899 PRINTS Disease resistance protein signature 100 115 - -
Pvu6g0200 899 PRINTS Disease resistance protein signature 257 271 - -
Pvu6g0200 899 PRINTS Disease resistance protein signature 493 509 - -
Pvu6g0200 899 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 689 IPR044974 GO:0006952
Pvu6g0200 899 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 717 882 IPR044974 GO:0006952
Pvu6g0200 899 Pfam NB-ARC domain 196 292 IPR002182 GO:0043531
Pvu6g0200 899 SUPERFAMILY "Winged helix" DNA-binding domain 293 398 IPR036390 -
Pvu6g0200 899 Gene3D Ribonuclease Inhibitor 397 708 IPR032675 -
Pvu6g0200 899 Gene3D - 222 306 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0200 Pvu-Chr6 9322345 9326582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0200 77 679 WRKY Transcription Factor Family AT5G45050 29.047 5.40e-70 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0200 - - pvu:PHAVU_006G019300g 1801.18