Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0194 ATGGCCCTTGGTATGGTGGGAGAGGCTCTTATCTCTGCTTGTATGGAGATCTTGATAGAAAGAATAGCTTCTCGAGAGTTTCGAGATTTCTTCTCCAGTACAAAGCTGGATATTTGTTTGTTGGATGAGTTGAAGATAAAGCTATTGGCAGTTAATGCTGTGCTCAATGATGCTGAGGAGAAGCAAATCACTGATCCTGCAGTGAAGAAATGGCTTGATGAGTTGAGAGATGTTGTCTTAGATGCAGAAGATTTGTTGGATGAAATCAATACACATGCTTTGAGCCGCACTTCTGAAGGAGGATCTAGAACATTTGCTACCAAGGTAAGATCCTTGCTTTCTTCTAGCTTTAAAAACTTCTATAAGGGTATGAATTCCAAGTTAGAGGCAATATCTAGAAGGCTAGAACATTTTGTAAGGCAAAAAGATATTCTTGGTTTGCAAAGTGTTATTAGGAGAGTCTCTTATAGAACAGTAACAGATTCATTGGTTGAGTCTGTTGTGGTTGCTAGAGAGAATGACAGGGAGAAGCTACTGAACATGCTTCTGTGTGATGATGGTGATGGCATGTCTAATGATATAGAAGTGATCACAGTATTGGGCATGGGGGGTCTGGGAAAAACAACCCTTGTTCAATGGCTTTATAATGATAGTGAAGTGCAGAAACATTTTGATTTTACAGCTTGGGCATGTGTGTCAGATGATTTTGATATTCTCATGGTAACGAAGAAAATTGTTGAATCTCTCACATCGGAAGATTGTCACATTACTAATCTTGATGTTCTTCGTGTTGAATTGAAGAATACCCTAAGAGATAAGAAATTTTTGCTTGTGCTTGATGACCTTTGGAATGAAAAGTATAACGATTGGCATCACCTAATAGCACCTTTTAGAAATGGGAGAAAGGGAAGTAAAATCATTGTAACAACCAGACAACAAAGAGTTGCACAGGTCACACATACATTTCCCACTTATGAGCTGAAACCTCTTAGTGATGAAAATTGCTGGCGCATACTGGCCAGACATGCATTTGGAAGTGAAGGTTACCACAATCATCCAATCCTAGAAGAAATTGGTAAAAAAATTGCAAAAAAATGTAATGGTCTGCCATTGGCAGCTAAAACATTGGGAGGCCTTTTGAGATCAAATGTAGATGTTGGGGAATGGAACAGAATTCTGAACAGCAATTTGTGGGCACATGATGATGTTTTACCAGCTTTGCGTATAAGTTATTTTCATCTTCCAGCACATTTGAAGAGATGTTTTGCTTACTGCTCTATTTTTCCAAAACAACATTTGTTGGACAGGAAGGAAATAGTTTTGTTATGGATGGCTGAAGGCTTTCTTCAACATGTTCATGAAGAGAAAGAAATGGAATCAATAGGTAACGACTGCTTCAATGAGTTATTATCTAGATCCTTGATTCAAAAAGACAATGCTGTTGCAGAGGAAAATTTTCGAATGCATGACCTCATCTATGATTTGGCTAAACTTGTGTCTGGAAGAAGTTCTTACCACTTTGATGGCAGTGAAATCCCAAGAACTGTTCGCCATTTATCATTTCTCAGAGAGATGTTTGATATCTCTGAAAAGTTTGAGGGCTTTTATGAGCTGAAGTGTTTGCGGACCTTTCTACCACGATTGTCATATCCATATGTACACTGTTACTTGACCAAAATGGTATCACATGGTTGGTTGCCAAAACTAAGATGTTTGAGAATACTTTCATTGTCTAAGTACACAAATATAACTGAGTTGCCTAATTCGATTGGCAATTTGTTGCACTTGAGGTATCTGGATCTTTCCTACACTTCAATTGAAAGCTTGCCCGATGAAACATTTATGCTTTACAATTTGCAAACTTTGATATTATCAAATTGTGAATCTCTTATTCAATTGCCTCAGCAGATAGGAAATCTGATTAACTTACGCCACCTTGACATCAGTGACACTAACTTGCCAGAGATGCCAACACAAATATGCAAATTACAACAACTCCGTACCTTGACAGTTTTTATTGTTGGAAGACAAAACGGACTAAGTATTAGAGATTTATCAAAATTTCCTTACCTTCAGGGCAAGCTTTCCATTATGAACCTGCAAAATGTTGTCAATCTTGTGGACGCTTTTCAGGCAAATTTACAGAAAAAAGAGCAGATTGAGGAGCTTATTCTAGGATGGGACAGTGATCCACAAGAACCGCAGTTTGAAAAAGATGTACTTCACAACTTGCAACCATCAACAAATTTGAAGAAACTCAATATCAAATATTATGGTGGCACTTCCTTTCCAAATTGGATTGGACATTTTTCATTTTCAAAGATCATAGTCCTTACTGTAAGTGATTGCAACAATTGCTTGTCACTTCCACCTTTTGGACAACTACCTTCGCTGAAGGAGCTTGTTATCAAAAGGATGAAAATGGTGAAGAAAGTTGGTCATGAGTTCTACGGTAGCAGTGTAGGCTCACAGTTGCTTCAGCCATTTCAATCACTAGAGAATCTGAAATTTGAAGATATGTCAGAGTGGCAGGAATGGCTACCATTTGAGAGTGAAGGCAGAAACTTTCCCTTTCCATGTCTTAAGACTTTGTACCTGTACAAGTGCCCCAAGCTAAAAGGAACCTTGCCAAGTCATCTACCTTCATTGACAAATGTGATTTTCTCAGAGTGCAACCAGCTGGTGACAAAATTATCTGATGTGCATTGGAATACATCAATTGAAGCAATACATATTAGAGAGGGACAAGAAACCTTGTTGTCTATGCTTGACAACTTCTCTTGTTGCGAACTATTGATTGAAAAGTGTGATAGCTTACAGTGTTTTCCCAGAATGATACTTAGTGCAAATTGTCTTCAAAAGTTGACTCTTTCAAATATCCCATCTTTGATTTCCTTCCCAGCTGATTGTTTGCCCACATTATTGCAATCACTTGACATTTGGCATTGTAGAAATTTAGAGTTCCTATCTCACAATACAAGGCCCAAATTCACATCACTTAAAACACTGAGAATATGGAATAGTTGCAGTTCCCTGACATCTTTTTCATTAGCTTGTTTCCCTGTCCTTCAAGAGCTTTATATCCGTTTTATTCCCAACTTGGAAGCAATTACTACTCAAGGGGGAGAAGCAGCTCCCAAATTAGTTGATTTTATTGTCACTGATTGTGAGAAACTTAGATCACTGCCAAATCAAATTGATCTCCCTTCCCTTGAACACTTGGACCTATCTGGCCTTCCCATGCTAGAATCATTGTCTCCAAGGTGTTTGCCTTCTTGTTTAAGATCACTTCATGTTGATGTTGGAATACTATCATCTATATCCAAACAAGAGTTAGGTTTGCTATTCCAACGCCTATCTTCTCTGTCACATCTTTTAGTCAAGGGTCTTGGTGATGAAGATCTTGTTAACAGGCTTTTGAAGGAGCAGTCCCTGCCTACTTCTCTAGAATATCTGTTCCTAAATAATTTCAGTGGCTTAAAGTTGTTGGAAGGAAAAGGGCTTCAAAGTCTCACTTCTCTCCAAATGCTTAACATATACAATTGTCCAAGTATTGAGTCCTTACCTGAGGATCAACTTCCATCATCTCTTCAAGTACTAAGTCTTAGGGAGTGCCCTTTACTGGAAGCAAGATATCAAAATCATAATGGGAAATACTGGTCTAAAATTGCTCACATTCCTGCAATCAAGATAAATGAAAAAGTCATAATATGA 3714 0.3807 MALGMVGEALISACMEILIERIASREFRDFFSSTKLDICLLDELKIKLLAVNAVLNDAEEKQITDPAVKKWLDELRDVVLDAEDLLDEINTHALSRTSEGGSRTFATKVRSLLSSSFKNFYKGMNSKLEAISRRLEHFVRQKDILGLQSVIRRVSYRTVTDSLVESVVVARENDREKLLNMLLCDDGDGMSNDIEVITVLGMGGLGKTTLVQWLYNDSEVQKHFDFTAWACVSDDFDILMVTKKIVESLTSEDCHITNLDVLRVELKNTLRDKKFLLVLDDLWNEKYNDWHHLIAPFRNGRKGSKIIVTTRQQRVAQVTHTFPTYELKPLSDENCWRILARHAFGSEGYHNHPILEEIGKKIAKKCNGLPLAAKTLGGLLRSNVDVGEWNRILNSNLWAHDDVLPALRISYFHLPAHLKRCFAYCSIFPKQHLLDRKEIVLLWMAEGFLQHVHEEKEMESIGNDCFNELLSRSLIQKDNAVAEENFRMHDLIYDLAKLVSGRSSYHFDGSEIPRTVRHLSFLREMFDISEKFEGFYELKCLRTFLPRLSYPYVHCYLTKMVSHGWLPKLRCLRILSLSKYTNITELPNSIGNLLHLRYLDLSYTSIESLPDETFMLYNLQTLILSNCESLIQLPQQIGNLINLRHLDISDTNLPEMPTQICKLQQLRTLTVFIVGRQNGLSIRDLSKFPYLQGKLSIMNLQNVVNLVDAFQANLQKKEQIEELILGWDSDPQEPQFEKDVLHNLQPSTNLKKLNIKYYGGTSFPNWIGHFSFSKIIVLTVSDCNNCLSLPPFGQLPSLKELVIKRMKMVKKVGHEFYGSSVGSQLLQPFQSLENLKFEDMSEWQEWLPFESEGRNFPFPCLKTLYLYKCPKLKGTLPSHLPSLTNVIFSECNQLVTKLSDVHWNTSIEAIHIREGQETLLSMLDNFSCCELLIEKCDSLQCFPRMILSANCLQKLTLSNIPSLISFPADCLPTLLQSLDIWHCRNLEFLSHNTRPKFTSLKTLRIWNSCSSLTSFSLACFPVLQELYIRFIPNLEAITTQGGEAAPKLVDFIVTDCEKLRSLPNQIDLPSLEHLDLSGLPMLESLSPRCLPSCLRSLHVDVGILSSISKQELGLLFQRLSSLSHLLVKGLGDEDLVNRLLKEQSLPTSLEYLFLNNFSGLKLLEGKGLQSLTSLQMLNIYNCPSIESLPEDQLPSSLQVLSLRECPLLEARYQNHNGKYWSKIAHIPAIKINEKVII* 1238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0194 1237 SUPERFAMILY L domain-like 487 910 - -
Pvu6g0194 1237 Gene3D - 40 134 - -
Pvu6g0194 1237 Pfam NB-ARC domain 191 394 IPR002182 GO:0043531
Pvu6g0194 1237 Gene3D - 410 498 IPR036388 -
Pvu6g0194 1237 PRINTS Disease resistance protein signature 196 211 - -
Pvu6g0194 1237 PRINTS Disease resistance protein signature 269 283 - -
Pvu6g0194 1237 PRINTS Disease resistance protein signature 366 380 - -
Pvu6g0194 1237 PRINTS Disease resistance protein signature 614 630 - -
Pvu6g0194 1237 Coils Coil 41 61 - -
Pvu6g0194 1237 ProSiteProfiles Leucine-rich repeat profile. 595 616 IPR001611 GO:0005515
Pvu6g0194 1237 PANTHER - 55 922 - -
Pvu6g0194 1237 Coils Coil 72 92 - -
Pvu6g0194 1237 SUPERFAMILY L domain-like 929 1222 - -
Pvu6g0194 1237 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 425 IPR027417 -
Pvu6g0194 1237 Pfam Rx N-terminal domain 40 103 IPR041118 -
Pvu6g0194 1237 Gene3D - 329 409 IPR042197 -
Pvu6g0194 1237 PANTHER DISEASE RESISTANCE PROTEIN RP 55 922 IPR044974 GO:0006952
Pvu6g0194 1237 SMART LRR_typ_2 1068 1092 IPR003591 -
Pvu6g0194 1237 SMART LRR_typ_2 593 616 IPR003591 -
Pvu6g0194 1237 SMART LRR_typ_2 640 663 IPR003591 -
Pvu6g0194 1237 Gene3D Ribonuclease Inhibitor 552 913 IPR032675 -
Pvu6g0194 1237 Gene3D - 150 322 IPR027417 -
Pvu6g0194 1237 CDD RX-CC_like 13 135 IPR038005 -
Pvu6g0194 1237 Gene3D Ribonuclease Inhibitor 914 1225 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0194 Pvu-Chr6 9226305 9231429 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0194 193 801 WRKY Transcription Factor Family AT5G45050 21.951 3.19e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0194 - - gmx:100803330 2025.37