Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0171 ATGGCTTACAGGCGTTGTCTCTTGATAAGAGGGAACCTCGTGAATCGAAAGTGCCACCCGTCTTTCAGTTTTGTTCTCCATAGTGATGAAGGGAAATCTGAATGCCCTGATGAAAAGTCACCTTCGGCAGGCATTAGTAATTCTATCCAAAGAAGGATGTTTGGGAACTCAGTTGATGGATCAATGTGGCGTTTTGCCTATTCTGAACCTAGAATGCATTCAAACATATTTCTTTCTCCGAGCTCTGTATATAATTTATGTCGACATATGTCAACAACCAATCAGGGTTCCGACAAGATTGAAATAATGTCTGACATAGCAGATGTTCTCAAAGACCAAGCGATGGAAGCTGTAACTTCTCAGGGTCCCATTCTTAGAGAAGTTGCAATTGCTTCTGCTGATTCTGTTTTACCTGTGAAGGCCTTGCAGTACATTATAGATGCCATGCATTCCTACACTGGTTTGAACTGGTGGGCAGCCATAGTTCTAACAACTCTCTTGATTCGAAGCGCAACAGTTCCACTCTTAATAAATCAACTTAAGGCCACTTCTAAGCTTACACTAATGAGGCCTCACATGGAAAAAATAAAGGAAGAGATGGAAGATAAGGCTATGGATCCCAACGCTGTTGCTGAAGGTCAGAAAAAAATGAAGATGCTATTTAAGGAATATGGTGCAAGTCCATTTACTCCATTGAAGGGGCTCTTTATTCAAGGTCCTGTCTTTATTAGTTTTTTCCTTGCGATAAGAACCATGGCTGAAAAGATGCCATCTTTCAAGCATGGGGGAGCCTACTTGTTTGTTGATCTCACAACTCCAGATGCGTTGTACATTTTGCCAGTTGTGACTGCATTGACATTCTTAATAACAGTAGAGTGCAATATGCAAGAAGGCATGGAAGGAAATCCAGCTGCTGGCACCATGAAAAAAGTCTCTAGGGTTCTTGCAGTCCTTACAGTTCCTTTCACCATGGGATTTCCGAAGGCTATATTTTGTTACTGGATTACATCAAATTTGTTTTCACTTGGGTATGGACTCGTTCTTAAAGCTCCTGGTGTAAAGAGAGCTTTGGGTATCCCCATAATACAGCAAGCAGCACCCGCCAGTGGTTCATCATCTCCCTTTTCTATATTTCCAGCCCTGAAACAAGCTACATCAGCAACAAAGGCACCGAAGTCATTGCCTGTTGAACCATCAAAACATCCACAGAGAAAGACATCTTCTGATGTCAATCTAAGACTAAAACGTTTAGAGAAACAAGTGAAAGGAAAAAAGAAAAACAAGAACTGA 1290 0.414 MAYRRCLLIRGNLVNRKCHPSFSFVLHSDEGKSECPDEKSPSAGISNSIQRRMFGNSVDGSMWRFAYSEPRMHSNIFLSPSSVYNLCRHMSTTNQGSDKIEIMSDIADVLKDQAMEAVTSQGPILREVAIASADSVLPVKALQYIIDAMHSYTGLNWWAAIVLTTLLIRSATVPLLINQLKATSKLTLMRPHMEKIKEEMEDKAMDPNAVAEGQKKMKMLFKEYGASPFTPLKGLFIQGPVFISFFLAIRTMAEKMPSFKHGGAYLFVDLTTPDALYILPVVTALTFLITVECNMQEGMEGNPAAGTMKKVSRVLAVLTVPFTMGFPKAIFCYWITSNLFSLGYGLVLKAPGVKRALGIPIIQQAAPASGSSSPFSIFPALKQATSATKAPKSLPVEPSKHPQRKTSSDVNLRLKRLEKQVKGKKKNKN* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0171 429 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEIN OXA1L 83 404 - -
Pvu6g0171 429 Coils Coil 407 427 - -
Pvu6g0171 429 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 156 345 IPR028055 -
Pvu6g0171 429 MobiDBLite consensus disorder prediction 387 429 - -
Pvu6g0171 429 Pfam 60Kd inner membrane protein 157 347 IPR001708 GO:0016021|GO:0032977
Pvu6g0171 429 MobiDBLite consensus disorder prediction 398 417 - -
Pvu6g0171 429 PANTHER OXA1 83 404 IPR001708 GO:0016021|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0171 Pvu-Chr6 7954553 7964604 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0171 160 428 Chloroplast and Mitochondria Gene Families AT2G28800 22.615 1.51e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0171 K03217 - gmx:100787806 701.049