Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0158 ATGGGTTTCCGCATAAAAGGTATTCTTAGACGAGCATCAGTTTCTACAATCCAAGTGGCCTCCAAGGGGGGTGAAGTACCAAAGGGCTATATTGCAGTTTATGTTGGAGATGAAATGAGGCGGTGTGTGATTCCAGTATCATACTTGAACCAGCCTTCATTTCAAGAATTGCTTAGTAAAGCAGAAGAAGAATTTGGATATGATCATCCAAAGGGTGCTCTCACAATTCCATGCCAGGAGGATGAGTTCCTAAATATCATCTCTCACTTCAATCAGTTGTAA 282 0.4149 MGFRIKGILRRASVSTIQVASKGGEVPKGYIAVYVGDEMRRCVIPVSYLNQPSFQELLSKAEEEFGYDHPKGALTIPCQEDEFLNIISHFNQL* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0158 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 91 IPR003676 GO:0009733
Pvu6g0158 93 Pfam Auxin responsive protein 15 88 IPR003676 GO:0009733
Pvu6g0158 93 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0158 Pvu-Chr6 7325200 7325741 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0158 15 83 Calmodulin-binding Proteins AT3G43120 53.623 2.59e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0158 K14488 - gmx:100786095 152.14