Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0157 ATGGGCTTTCGTTTACCTGGTATCAGAAGGGCATCGATCGCAGCAAACCAGACATCTTCTAAGGGTATGGAGGTGCAAAAGGGTTATCTTGCAGTGTACGTTGGAGAGAAAATGAAGCGATTTGTGATCCCCATATCATACTTGAGACAACCTTCATTCCAAGACATGTTGAGTGAAGCAGAGGAAGAGTTTGGATTCGATCATCCCATGGGTGGTCTTACAATTCCTTGCAGTGAAGATGTCTTTCAAAGTACAACTTCACACTTGAGTAGACATTAA 279 0.4301 MGFRLPGIRRASIAANQTSSKGMEVQKGYLAVYVGEKMKRFVIPISYLRQPSFQDMLSEAEEEFGFDHPMGGLTIPCSEDVFQSTTSHLSRH* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0157 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Pvu6g0157 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
Pvu6g0157 92 Pfam Auxin responsive protein 12 87 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0157 Pvu-Chr6 7271048 7271704 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0157 24 92 Calmodulin-binding Proteins AT3G43120 47.826 2.38e-18 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0157 K14488 - gmx:113002386 155.606