Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0156 ATGACAGTAAAGCAAATCAGCATGCGAATGTGGCAAGGCAAGCTTTCTTGGACATTAATATTGAAAATATCCCTTGGGGCTGCTAGGGGTCTTGCTTTTCTCCCCAACACAGAAACTAAAGTCATATACCGAGATTTCAAGACTTCTAATATCCTGCTTGATACGAACTACAATGCCAAACCTTCTGATTTTGGGCTGGCCAGAGATGGACCAACTGGTTATAAGAGCCATGTTTCTACAAGGGTCATGGGAACACATGGATATGCAGCACCAGAGTATCTAGCAACAGGCCCATCCATACTTCAATACAGTTAG 315 0.4317 MTVKQISMRMWQGKLSWTLILKISLGAARGLAFLPNTETKVIYRDFKTSNILLDTNYNAKPSDFGLARDGPTGYKSHVSTRVMGTHGYAAPEYLATGPSILQYS* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0156 104 Pfam Protein kinase domain 18 95 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0156 104 ProSitePatterns Serine/Threonine protein kinases active-site signature. 41 53 IPR008271 GO:0004672|GO:0006468
Pvu6g0156 104 ProSiteProfiles Protein kinase domain profile. 1 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0156 104 PANTHER OS01G0588500 PROTEIN-RELATED 13 97 - -
Pvu6g0156 104 SUPERFAMILY Protein kinase-like (PK-like) 10 97 IPR011009 -
Pvu6g0156 104 Gene3D Transferase(Phosphotransferase) domain 1 4 103 - -
Pvu6g0156 104 PANTHER KINASE 1B 13 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0156 Pvu-Chr6 7224987 7227056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0156 12 97 Glycoside Hydrolase AT3G07070 58.621 1.17e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pvu6g0156 Pkinase 7.6e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0156 - - pvu:PHAVU_006G015000g 213.386