Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0105 ATGGAAGATAACAACCAGGCTTCATCTCCTGCTTCACCAACCGAAGGAAAACCAATACGATGCAGAGCGGCGATTGCTAGAAAAGCTGGTGAGCCATTGGTTATTGAAGAGATAACTGTGGCGCCACCAATGCCTCGTGAGGTGCGGATTCGTGTTATCTGTTCCTCTCTCTGCCACAGTGACATCACTTTCAGGAACCTCCAGGACTTTCCTGCCATTTTTCCAAGGATTCTGGGTCATGAGGCAACTGG 251 0.494 MEDNNQASSPASPTEGKPIRCRAAIARKAGEPLVIEEITVAPPMPREVRIRVICSSLCHSDITFRNLQDFPAIFPRILGHEAT 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0105 83 Gene3D - 7 83 - -
Pvu6g0105 83 Pfam Alcohol dehydrogenase GroES-like domain 46 82 IPR013154 -
Pvu6g0105 83 PANTHER ALCOHOL DEHYDROGENASE 14 82 - -
Pvu6g0105 83 SUPERFAMILY GroES-like 14 82 IPR011032 -
Pvu6g0105 83 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 14 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0105 Pvu-Chr6 5056828 5058366 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0105 K00121 - gmx:100817521 138.272
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0105 6 5056828 5058366 Pvu8g2149 8 51911675 51915071 PCT