Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0104 GTTGTGGAAAGTGTAGGGAAGGATGTAACTGAAGTTACAAAAGGCGATGTGGTTATTCCAGTTATCCTACCAGAATGTGGGGAGTGCATAGATTGCAAATCAACCAAGAGCAACCGTTGTACTATTTTCCCTTTCAAGGTGTCTCCCTGGATGCCTCGAGATGGTACCTCTAGATTCACTGACAAGAATGGAGAGATCATCTACCATTTTTTGTTTATTTCAAGCTTCAGTGAGTACACAGTGGTGGACATTGCCAATATTATAAAGATTGATCCAGAAATTCCTCCTGACAGGGCTTGCCTTCTTGGATGTGGTGTTTCAACAGGGGTAGGTGCTGCTTGGAGAACTGCTGGTGTGGAACCAGGGTCTACAGTAGCTATTTTTGGGCTGGGATCTATTGGATTGGCAGTTGCAGAGGGAGCAAGACTTTGTGGAGCAACTAGGATTATAGGTGTGGACATCTACCCAGAAAAATTTGAAATTGGAAAAAAGTTTGGAGTCACTGACTTTGTGCATGCAGGAGAATGTGGGGGCAAACCTGTGAGCCAGTTTATCATAGAGATGACTGGTGGGGGAGCAGATTATTGCTTTGAATGTGTTGGTACGGCATCAGTGGTTCTTGAAGCATATGCTTCTTGTAGAAAGGGTTGGGGAAAAACAATTGTTATAGGAGTGGACAAGCCAGGAGCCAGGATAAATCTCAGTTCCCATGAGGTCCTTCATGACGGGAAGAGCCTCATGGGATCCTTGTTTGGAGGTCTAAAACCCAAGTCTCATGTACCTATTCTCCTTAAACGTTACGTGGACAAGGAATTGCAGTTGGATGAATTTGTCACTCATGAGGTGGAGTTTAAGGACATCAACAAAGCTTTTGATTTATTGAGTACAGGAAAGTGTCTTCGATGTGTGATTTGGATGGATAAATGA 927 0.4369 VVESVGKDVTEVTKGDVVIPVILPECGECIDCKSTKSNRCTIFPFKVSPWMPRDGTSRFTDKNGEIIYHFLFISSFSEYTVVDIANIIKIDPEIPPDRACLLGCGVSTGVGAAWRTAGVEPGSTVAIFGLGSIGLAVAEGARLCGATRIIGVDIYPEKFEIGKKFGVTDFVHAGECGGKPVSQFIIEMTGGGADYCFECVGTASVVLEAYASCRKGWGKTIVIGVDKPGARINLSSHEVLHDGKSLMGSLFGGLKPKSHVPILLKRYVDKELQLDEFVTHEVEFKDINKAFDLLSTGKCLRCVIWMDK* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0104 308 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 94 269 IPR036291 -
Pvu6g0104 308 Pfam Alcohol dehydrogenase GroES-like domain 1 90 IPR013154 -
Pvu6g0104 308 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 1 305 - -
Pvu6g0104 308 Pfam Zinc-binding dehydrogenase 133 253 IPR013149 -
Pvu6g0104 308 PANTHER ALCOHOL DEHYDROGENASE 1 305 - -
Pvu6g0104 308 SUPERFAMILY GroES-like 1 115 IPR011032 -
Pvu6g0104 308 Gene3D - 1 301 - -
Pvu6g0104 308 Gene3D - 109 249 - -
Pvu6g0104 308 SUPERFAMILY GroES-like 257 305 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0104 Pvu-Chr6 5050860 5055698 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0104 K00121 - gmx:100817521 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0104 6 5050860 5055698 Pvu8g2151 8 51920751 51923868 PCT
Pvu8g2152 8 51932589 51936106 Pvu6g0104 6 5050860 5055698 PCT