Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0068 ATGGAAGGTGGATTGGGGTGTGTTCTGCTTCCCCTTCTGCTGTTCTGTGTTGTGTTGACAGCAGAATCGGCGTGCAAGGAGGGTTGCCCTCTGGCACTGGGGTCCTACTACATGTGGCAGAACTCAAACCTAACATACATCTCCCAGATCATGGCCTCGTCCCTTCTCACCACTGCCGACGACATAGTCCTCTACAACAAGGACACCATACCCAACAAGGATTCTGTCCAGGCCTTCATAAGGGTCAACGTCCCCTTCCCTTGCGACTGCATCGACGGCCAGTTTCTCGCACACACCTTCAAGTACGATGTTCAGTCGCAGGACTCATATGAGTATGTCGCCAGGACCGTGTACTCCAACCTCACCGATGTTGCCTGGCTGAGGAATTTCAACAGCTACGAACCCGATAACATTCCCGACACGGCCACGCTCAACGTTACGGTGAATTGTTCATGTGGGAACAGTGATGTTGCGGATTATGGGTTGTTCATCACGTACCCTCTTAGAACCGGGGAGACTCTCGGCTCGGTGGCTGCTGCTGTGAGCCTTGACTCGGGGTTGCTGCAGAGGTACAATCCTGGCGTCAATTTCAACCAGGGGAGTGGACTCGTTTATATTCCCGGAAAAGATCAAAATGGTAGCTATGTGTTTTTGGCGTCCAGTTCAGGAGGTCTTGCTGTTGGGGCTATTGCTGGAATAGTTGTTGGAGTTGTGGCAGTTCTTCTTCTATTAGGAGTTTTTATATATTTTAGAAGATTCCGGAAGAAGATACAGAAGGATGAACTTCCACGAGATTCTAGTGCACTCTTTGCTCAACATGGGAAGGATGAAGCTTCTCGTAGTAGTGCGAATGAAACTTTAGGACCTGGTGGTCCTGCCGCCATCACAGGCATAAAAGTGGACAAATCGGTGAAATTCACATATGAGGAACTGGCAACTGCCACAGATAACTTTAGTTTGGCTAATAAAATTGGTCAAGGAGGTTTTGGGTCAGTCTATTATGCGGAGCTGAGGGGAGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCAACAAAAGAATTTCACGCTGAATTGAATGTCTTGACACGTGTTCATCATTTAAACTTGGTGCGGTTGATTGGGTATAGCATGGAGGGCTCTCTTTTCCTTGTCTATGAATACATTGAAAATGGAAACCTAAGTCAACATCTGCGTGGTTCAGGTAGTAGAGAACCACTGCCATGGGCTACTCGTGTGCAGATTGCTTTGGATTCTGCAAGAGGTCTTGAGTATATTCACGAGCATACAGTGCCTTTATATATTCATCGTGACATAAAGTCAGCAAATATATTAATAGACAAAAACTTCCGGGGCAAGGTTGCTGATTTTGGATTAACCAAACTTACAGAAGTTGGAAGTTCATCACTTCCCACAGGTCGCCTAGTTGGAACATTTGGATACATGCCACCAGAGTATGCTCAATATGGGGATGTTTCTCCCAAAGTAGACGTGTATGCTTTTGGAGTTGTTCTTTATGAACTTATTTCGGCTAAGGAAGCAATTGTCAAGACAAACGATTCTGCTGTCGACTCAAAGGGCCTAGTAGCTCTGTTTGATGGAGTTTTTGGTCAGCCGGATCCCACTGAAGATCTCTGCAAACTAGTTGATCCAAGGCTTGGGGATAACTACCCAATTGATTCTGTCCGCAAGATGGCACAACTAGCCAAAGCATGCACACAAGACAATCCGCAACTCCGTCCAAGTATGAGATCTATTGTGGTAGCGTTGATGACACTTTCTTCAACTACAGACGAGTGGGATGTTGGTTCTTTCTATGAAAATCAAAATCTTGTGAATCTAATGTCAGGAAGATAG 1857 0.4604 MEGGLGCVLLPLLLFCVVLTAESACKEGCPLALGSYYMWQNSNLTYISQIMASSLLTTADDIVLYNKDTIPNKDSVQAFIRVNVPFPCDCIDGQFLAHTFKYDVQSQDSYEYVARTVYSNLTDVAWLRNFNSYEPDNIPDTATLNVTVNCSCGNSDVADYGLFITYPLRTGETLGSVAAAVSLDSGLLQRYNPGVNFNQGSGLVYIPGKDQNGSYVFLASSSGGLAVGAIAGIVVGVVAVLLLLGVFIYFRRFRKKIQKDELPRDSSALFAQHGKDEASRSSANETLGPGGPAAITGIKVDKSVKFTYEELATATDNFSLANKIGQGGFGSVYYAELRGEKAAIKKMDMQATKEFHAELNVLTRVHHLNLVRLIGYSMEGSLFLVYEYIENGNLSQHLRGSGSREPLPWATRVQIALDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRGKVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKTNDSAVDSKGLVALFDGVFGQPDPTEDLCKLVDPRLGDNYPIDSVRKMAQLAKACTQDNPQLRPSMRSIVVALMTLSSTTDEWDVGSFYENQNLVNLMSGR* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0068 618 Gene3D Phosphorylase Kinase; domain 1 294 388 - -
Pvu6g0068 618 SUPERFAMILY Protein kinase-like (PK-like) 301 590 IPR011009 -
Pvu6g0068 618 CDD STKc_IRAK 324 587 - -
Pvu6g0068 618 ProSiteProfiles Protein kinase domain profile. 318 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0068 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Pvu6g0068 618 Pfam Protein tyrosine and serine/threonine kinase 320 589 IPR001245 GO:0004672|GO:0006468
Pvu6g0068 618 Gene3D Transferase(Phosphotransferase) domain 1 389 610 - -
Pvu6g0068 618 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 8 618 IPR044812 GO:0019199|GO:0045087
Pvu6g0068 618 SMART serkin_6 318 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0068 618 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Pvu6g0068 618 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1 8 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0068 Pvu-Chr6 3155122 3164819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0068 12 618 Receptor kinase-like Gene Family AT3G21630 58.929 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pvu6g0068 PK_Tyr_Ser-Thr 4.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0068 - K13429 gmx:100777781 1025.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0068 6 3155122 3164819 Pvu8g2184 8 52294767 52299154 PCT