Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0005 ATGGCGGAGGTGGCGAGATCAGTGGTGCACGATGTTTTGGGACAAAGAGTCGTCGACGTAGACCAGCCAATCGTCGATTACATCGTTAACGTCCTTGCTGACGATGACTTCGACTTCGGCCTCGACGGCGAAGGCGCCTTCGAAGCCCTCGGCGAGCTCCTCGTTGCTGCCGGCTGTGTCGACGATTTCTCCGAGTGCCGCTCCGTGTGCAGCACGTTGTGCGACAAGTTCGGGAAGCACGGTTTGGTGAAGGAGAAGCCCGCTGTGCGGAGCCTGGCGGCGCCGTTTCGAATGAACGAAGGCTTGGACGACGTCGAAGCTCCCAAGAAGAAGCCCGAGCCCGTCGACGGCCCTCTGCTATCGGAACGTGACCGTCTAAAGCTCGAGAGAAGGAAGCGCAAGGATGAACGCCAGCGAGAGGCACAATATCAAATGCACTTGGTGGAGATGGAGGCAGCGCGAGCAGGTATGCCTGTGGTTTGTGTAAGGCATGAGAGCCTTGGGGGACCTAACGTGAAGGACATTCACATGGAGAATTTCAATATCTCTGTTGGTGGGCGGGATCTAATTGTGGATGGTTGTGTCACACTTTCGTTTGGAAGGCATTATGGTTTGGTAGGAAGAAACGGGACGGGGAAAACCACTTTTCTTAGACACATGGCTATGCATGCCATTGATGGTGTTCCGAGGAATTGTCAAATATTGCATGTGGAACAAGAGGTGACAGGTGATGATACCACAGCCTTGCAGTGTGTCCTCAACTCTGACATTGAGAGGACTCAGCTTATTGAGGAAGAAGCTCAGTTAGTTGCTCAACAGAGGGAATTTGAGGACAAAATCGAAAAGGGTGACTCAAATGGATTGCTTGGCAGGGATAGCATTTCACAAAGGCTTGAGGAAATATATAAGAGGCTTGAACACATTGATGCTGATTCTGCAGAGGCACGAGCAGCATCTATATTGGCGGGTTTGAGTTTCTCTCCTGAGATGCAGAAGAAGGCAACAAAAACGTTTTCAGGAGGATGGCGGATGCGAATAGCTCTTGCCCGTGCACTGTTTATAGAGCCTGATATATTGCTTCTTGATGAGCCTACGAATCATCTTGATCTTCATGCTGTCTTATGGCTTGAGTCGTACTTAGTTAAATGGCCAAAAACATTTATTGTTGTTTCACATGCTAGAGAATTTTTAAACACGGTGGTTACTGATATAGTTCACTTGCAAAACCAAAAGTTGACTACTTACAAAGGGAATTATGATATTTTTGAGAGGACTCGAGAAGAACAAGTTAAAAACCAGCAAAAAGCATTGGAGGCAAACGAGCGCGCAAGATCTCATATGCAGACCTTTATTGACAAGTTCCGTTATAATGCAAAGAGGGCATCACTCGTTCAATCTAGAATCAAGGCTTTGGACCGAATGGGCCATGTGGATGAAATTGTTAATGATCCTGACTACAAATTTGAGTTCCCCACTCCAGATGATAGACCTGGTCCACCCATAATAAGTTTCAGTGATGCATCATTTGGTTATGCTGGGGGCCCCCTTCTTTTTAAGAATTTGAACTTTGGGATTGATCTTGACAGCCGCATTGCAATGGTTGGACCAAATGGTATTGGCAAATCAACTATACTTAAGTTAATTGCTGGGGAACTTCAGCCCAGTTCTGGGACTGTCTTCCGTTCTGCCAAGGTTCGTATAGCAGTGTTCAGTCAGCACCATGTTGATGGTCTGGACTTATCCTCAAATCCTCTACTGTATATGATGCGCTGCTATCCTGGAGTTCCAGATCAGAAGCTTCGAGCTCACTTAGGTTCTTTTGGTGTAACTGGAAATCTTGCACTGCAGCCAATGTATACTTTGTCAGGTGGTCAGAAAAGCAGGGTTGCCTTTGCAAAGATAACTTTTAAGAAGCCACACATAATATTGCTTGATGAGCCTTCCAATCATCTGGATTTGGATGCTGTTGAGGCCCTTATCCAAGGTCTTGTCCTGTTCCAAGGAGGCATTCTAATGGTGAGTCACGATGAACACCTTATCTCTGGAAGCGTGGAGGAACTATGGGTTGTATCCGAAGGAAGAGTGGCACCATTCCATGGCACCTTCCATGATTATAAGAAGATACTCCAATCAGCCTAG 2139 0.4703 MAEVARSVVHDVLGQRVVDVDQPIVDYIVNVLADDDFDFGLDGEGAFEALGELLVAAGCVDDFSECRSVCSTLCDKFGKHGLVKEKPAVRSLAAPFRMNEGLDDVEAPKKKPEPVDGPLLSERDRLKLERRKRKDERQREAQYQMHLVEMEAARAGMPVVCVRHESLGGPNVKDIHMENFNISVGGRDLIVDGCVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGVPRNCQILHVEQEVTGDDTTALQCVLNSDIERTQLIEEEAQLVAQQREFEDKIEKGDSNGLLGRDSISQRLEEIYKRLEHIDADSAEARAASILAGLSFSPEMQKKATKTFSGGWRMRIALARALFIEPDILLLDEPTNHLDLHAVLWLESYLVKWPKTFIVVSHAREFLNTVVTDIVHLQNQKLTTYKGNYDIFERTREEQVKNQQKALEANERARSHMQTFIDKFRYNAKRASLVQSRIKALDRMGHVDEIVNDPDYKFEFPTPDDRPGPPIISFSDASFGYAGGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCYPGVPDQKLRAHLGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHIILLDEPSNHLDLDAVEALIQGLVLFQGGILMVSHDEHLISGSVEELWVVSEGRVAPFHGTFHDYKKILQSA* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0005 712 PANTHER NON-TRANSPORTER ABC PROTEIN 121 710 - -
Pvu6g0005 712 ProSitePatterns ABC transporters family signature. 621 635 IPR017871 GO:0005524
Pvu6g0005 712 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 438 IPR027417 -
Pvu6g0005 712 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 121 710 - -
Pvu6g0005 712 Gene3D - 465 712 IPR027417 -
Pvu6g0005 712 CDD ABCF_EF-3 175 411 - -
Pvu6g0005 712 ProSitePatterns ABC transporters family signature. 338 352 IPR017871 GO:0005524
Pvu6g0005 712 Pfam ABC transporter 519 649 IPR003439 GO:0005524
Pvu6g0005 712 Pfam ABC transporter 196 366 IPR003439 GO:0005524
Pvu6g0005 712 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 175 434 IPR003439 GO:0005524
Pvu6g0005 712 MobiDBLite consensus disorder prediction 103 122 - -
Pvu6g0005 712 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 483 702 IPR027417 -
Pvu6g0005 712 CDD ABCF_EF-3 502 694 - -
Pvu6g0005 712 Pfam ABC transporter 405 485 IPR032781 -
Pvu6g0005 712 Gene3D - 170 464 IPR027417 -
Pvu6g0005 712 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 502 711 IPR003439 GO:0005524
Pvu6g0005 712 SMART AAA_5 199 411 IPR003593 -
Pvu6g0005 712 SMART AAA_5 527 694 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0005 Pvu-Chr6 106041 115956 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0005 464 663 Calmodulin-binding Proteins AT2G36910 25.541 1.78e-09 59.3