Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu6g0004 | ATGGCAATGGTTGAGCCTCTTAATGTTACAAGTCTAAGGAATAAGCTCAAGACGCTTTGTGCTGTGGATGGCTGCTCCTACGTCATTTTGTGGCGCATTCATCCTCAAAATACCTTGGTGCTGAGAGTGGAAGATGTATACTGTGAAGATCAATTGGGAGAAGAGATTGTCAACACAGTTCCACATGTCCATTCGATGGGTGAAGGAATTGTTGGTCAAGCTGCTTTGACTGGCAAGCACAGATGGGTGGACTCAGATGGTCAAATGTGTGAGGAAGATTATGGTTTGCATCCACAGTTCTTGTCCGGGATAAAGACAGTTGTGGTGATATCTGTTAAACCATGGGGAGTGGTACAATTTGGATCCAAAAAGAAGATTTTGGACAGAGTGAAATTTGTGGAACAAACAGAAAGGTTGTTGAGGGGGATAGAAGATGAGGGTTTGCTTGACGTATTCAATAGTAGTAGAGATCTATATCTAGATTGTGAAAACTATGATCTCAATGGATTGTTGGCTTCCATATCTTCAGAAAATTTATATGATTGGAATCTCAAATCTGTTCATAGTGACAACTCTGAAATGCTATTGGGAAATTCATGTTCCTATGCAAGTCTCGATGACTCCTTCCCTTCCATGGATATGATTCTTGTTGAAGAAGGAACGACACCGATGCATGGATTCTCTTATCTTTGTGACCAATTGGCACCTGCAGTAGAAGCTCAAGCTGTATTCTCGGATAGGGATAGTAATGATTATTCCATGAACACCATAATTTCTAGAAACCCCAGTTTTGGCACATGGAGTGGTGAAATTTCATCATTGAATTCACTGGGGCAACAACCGGTATCTGAGATAAGGGATGAAGATGTTGAGTATATGCACTGTAAAGAGGCAAATGAATTTTCTAGTAACAAGCTAGCTGTTCAGGATTCAACATTGTCCTCATTAATTAGTTTGAATAGACTGTTAGACCCAACAGGCCCATTTCAATACCACACAGGATTTCCACTGGATATCCAACACTCTGCTCAATCTAGTATTGTGGGAGAAGTTAATTATCCTGATACTTTGAGTATGGTGCATGATCTCCCCAAGGACCTAGAGCCAGTTGATTCATTAGAACAATTTTCAAAGTTCTTCTCCATGAATGATCTCTGCCATTTGTTAGCTCCTTCAGACCACAGCATTTATGGAACAGTGACTGCATTGGATGAGTCAAGAGGATGTAATACCCCATCTTTTGGTCTGATTGGTAGTGGTGGCATTGATGATGTTCCAGTCACATATCAAGCTGAGCATAATAGTTCTATCACAACTACACCCAACATGGATGGTCAAGAAACATACTCAGCTATGCATTGTTCGGAAAACAGCCTCTTGGATAGCATGAGACATCATTTGAGCTGTGACCAAGCCGAGGAGTGCTGGGACAGTGTGGCTATGCTTACACCAGTGGTGAGTGCTGCTGCTACTAACACTGCTTTCTCTGATTGCATATCAGAGTCAAATGTTGGAACATTTGGCTCTGGAAAGAGATTATTCTCAGAGTTAGGAATTGAAGAGTTTCTCCATGGTTCTAATTTTGGAGATCAACCATCAACCAATAGAAAGCAGAGGACAGAATCTTCACCTGAGAAAAGAAATCCAAAGCATTTGACTAGTCATGCTTTGGTTCCTAAATTGGACATAACAAACAATCTTGCAGACCAGAAAGAAATATTCTCAAAGTCACAGGTAGGAGTAGGAGGCTTGTGGATAAATGACAGAAATGGAAATACTGGGAGAGCTGGTCGGGCAGATGCAAAGCCTCAAAAGGTGGTGGAACACAATAAGGTCACCAGGAAAAGGGCTAGACCAGGTGAAACAACTCGACCGAGACCTAAAGATCGTCAGCAGATTCAAGACCGCATTGGAGAGTTGAGAGGGATCATTCCCAATGGTGGAAAGTGTAGCATTGATTCTTTGTTAGACCGAACCATCAGATACATGATATTCTTACAAAGCATCACCAAGTATGCAGACAAGCTGCAAGAGCCCAGTGAGCCTAAGCTCATTGAGAAGGCAAAAGACAGCAGTGTGGGAGATAGCAAGAAAAGTGGTGGTGGTGTTACATGTGCATTTGAAGTGGAAGGTCAAACAATGGTATGCCCAATTATAGTGGAGGATATGGACCCACCTGGCCAAATGCTTATAGAGATGCTTTTTGAAGAGCAGGGCTCCTTCCTTGAGATAGTGGACATCATTGGTGGGTTTGGATTGAATATCTTGAAGGGAAAGATGGAAATTAGGGACACTAAAATATGGGCACGCTTTATAGTTGAGGCGAACAGACATGTAACAAGGATAGATGTATTTTGGTCCCTCATCAGAGTTGTACAGCAGAAAAACACATCTGGAGCGGATTCACCAAACAGGCATTGTAATATTAATGATGCTGCCTTTTCTTCAATGGACAAATATGAGCAACAGATATGCCAGTACTACCCATGTACATGA | 2496 | 0.4187 | MAMVEPLNVTSLRNKLKTLCAVDGCSYVILWRIHPQNTLVLRVEDVYCEDQLGEEIVNTVPHVHSMGEGIVGQAALTGKHRWVDSDGQMCEEDYGLHPQFLSGIKTVVVISVKPWGVVQFGSKKKILDRVKFVEQTERLLRGIEDEGLLDVFNSSRDLYLDCENYDLNGLLASISSENLYDWNLKSVHSDNSEMLLGNSCSYASLDDSFPSMDMILVEEGTTPMHGFSYLCDQLAPAVEAQAVFSDRDSNDYSMNTIISRNPSFGTWSGEISSLNSLGQQPVSEIRDEDVEYMHCKEANEFSSNKLAVQDSTLSSLISLNRLLDPTGPFQYHTGFPLDIQHSAQSSIVGEVNYPDTLSMVHDLPKDLEPVDSLEQFSKFFSMNDLCHLLAPSDHSIYGTVTALDESRGCNTPSFGLIGSGGIDDVPVTYQAEHNSSITTTPNMDGQETYSAMHCSENSLLDSMRHHLSCDQAEECWDSVAMLTPVVSAAATNTAFSDCISESNVGTFGSGKRLFSELGIEEFLHGSNFGDQPSTNRKQRTESSPEKRNPKHLTSHALVPKLDITNNLADQKEIFSKSQVGVGGLWINDRNGNTGRAGRADAKPQKVVEHNKVTRKRARPGETTRPRPKDRQQIQDRIGELRGIIPNGGKCSIDSLLDRTIRYMIFLQSITKYADKLQEPSEPKLIEKAKDSSVGDSKKSGGGVTCAFEVEGQTMVCPIIVEDMDPPGQMLIEMLFEEQGSFLEIVDIIGGFGLNILKGKMEIRDTKIWARFIVEANRHVTRIDVFWSLIRVVQQKNTSGADSPNRHCNINDAAFSSMDKYEQQICQYYPCT* | 832 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu6g0004 | 831 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 617 | 666 | IPR011598 | GO:0046983 | |
Pvu6g0004 | 831 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 630 | 672 | IPR036638 | GO:0046983 | |
Pvu6g0004 | 831 | MobiDBLite | consensus disorder prediction | 601 | 632 | - | - | |
Pvu6g0004 | 831 | Pfam | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 60 | 137 | IPR025610 | - | |
Pvu6g0004 | 831 | MobiDBLite | consensus disorder prediction | 524 | 554 | - | - | |
Pvu6g0004 | 831 | PANTHER | TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED | 11 | 825 | IPR043561 | GO:0003700|GO:0006355 | |
Pvu6g0004 | 831 | MobiDBLite | consensus disorder prediction | 588 | 632 | - | - | |
Pvu6g0004 | 831 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN-RELATED | 11 | 825 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu6g0004 | Pvu-Chr6 | 77476 | 81824 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu6g0004 | 614 | 802 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT2G27230 | 53.968 | 1.39e-60 | 215 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu6g0004 | - | - | pvu:PHAVU_006G000400g | 1682.92 |